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IMGVR_UViG_3300029928_000198-3300029928-Ga0116643_100008152
Arc-VirIMGVR_UViG_3300029928_000198-3300029928-Ga0116643_100008152
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-96
Domain cluster:
rep: KJ019146.1__AIX42271.1__Syn7803C16_52__00052__D2-97
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 26.6 | 9.50e-06 | 100.0% | 83.7% |
| PF13455.13 | MUG113 | 24.5 | 4.40e-05 | 80.5% | 82.2% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jfdA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.70 | 36.0 | 3.94e-01 | 96.3% | 60.6% |
| 2kx2A00 | 3.30.780.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.57 | 36.0 | 3.44e-01 | 100.0% | 55.2% |
| 1eluA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 35.0 | 3.18e-01 | 98.8% | 44.3% |
| 2qsdB02 | 3.50.100.10 | Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain | 0.55 | 38.0 | 3.90e-01 | 90.2% | 75.6% |
| 2d5mA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 41.0 | 3.25e-01 | 87.8% | 45.9% |
| 5d8dD03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 30.0 | 3.29e-01 | 81.7% | 68.2% |
| 6h8oA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.51 | 43.0 | 4.13e-01 | 96.3% | 91.6% |
| 2cg8B02 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.51 | 41.0 | 3.51e-01 | 87.8% | 85.6% |
| 1rtzA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.51 | 41.0 | 3.44e-01 | 91.5% | 98.7% |
| 1eucB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 34.0 | 2.81e-01 | 70.7% | 66.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989300 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.97 | 94.0 | 8.31e-01 | 100.0% | 77.3% |
| 3388590 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.68 | 42.0 | 4.79e-01 | 97.6% | 85.0% |
| 3399490 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.66 | 46.0 | 5.11e-01 | 97.6% | 92.3% |
| 4963 | 4012.1.1.1 ↗ | a+b two layers › SSHS domain › SSHS domain in type II DNA topoisomerase › SSHS domain in type II DNA topoisomerase › TOPRIM_C | 0.63 | 34.0 | 4.33e-01 | 76.8% | 100.0% |
| 3787712 | 3333.1.1.0 ↗ | a+b two layers › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 | 0.61 | 54.0 | 4.47e-01 | 100.0% | 92.0% |
| 3263434 | 3333.1.1.0 ↗ | a+b two layers › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 | 0.60 | 52.0 | 4.03e-01 | 100.0% | 93.8% |
| 2774829 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.57 | 49.0 | 3.49e-01 | 96.3% | 63.1% |
| 3976410 | 3115.1.1.11 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Exonuc_VIII | 0.55 | 45.0 | 4.50e-01 | 100.0% | 87.1% |
| 4006142 | 2008.1.1.185 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exonuc_VIII | 0.55 | 44.0 | 4.46e-01 | 100.0% | 88.1% |
| 5009727 | 1.1.5.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › UbiD | 0.54 | 42.0 | 3.18e-01 | 87.8% | 40.9% |
| 4468424 | 4943.1.1.1 ↗ | a+b two layers › YcgL/NE1680-like › YcgL/NE1680-like › YcgL/NE1680-like › YcgL | 0.54 | 43.0 | 4.30e-01 | 100.0% | 85.9% |
| 4015089 | 101.1.7.0 ↗ | alpha arrays › HTH › HTH › Methylated DNA-protein cysteine methyltransferase-C | 0.53 | 37.0 | 3.45e-01 | 100.0% | 57.1% |
| 4129069 | 887.1.1.1 ↗ | a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 | 0.53 | 41.0 | 4.23e-01 | 86.6% | 93.7% |
| 4661047 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.51 | 41.0 | 3.02e-01 | 93.9% | 53.6% |
| 3248361 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.50 | 35.0 | 3.26e-01 | 74.4% | 85.5% |