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IMGVR_UViG_3300029928_000218-3300029928-Ga0116643_100021620

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300029928_000218-3300029928-Ga0116643_100021620 ↗
Kingdom:: archaea

Quality

72.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 63-170

PDB

Domain cluster: representative

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yo7A00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.66	48.0	4.69e-01	75.9%	93.3%
2gscC00	1.20.1440.60	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence	0.63	48.0	4.79e-01	79.6%	95.5%
8ex5A01	1.20.1250.20	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains	0.59	43.0	3.60e-01	75.9%	95.8%
1otkA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.58	51.0	3.91e-01	95.4%	75.0%
3h4cA01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.55	43.0	4.52e-01	83.3%	99.0%
4g75A01	1.20.1440.280	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.55	43.0	3.83e-01	84.3%	90.4%
2z0qA01	1.20.900.10	Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain	0.54	41.0	3.47e-01	80.6%	82.9%
1v4aA01	1.10.4050.10	Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE	0.54	41.0	4.12e-01	89.8%	79.8%
3ghyA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.54	43.0	4.17e-01	88.0%	88.0%
4an8A02	1.10.132.100	Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 ›	0.53	39.0	3.82e-01	79.6%	86.9%
2q00B00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.52	40.0	3.88e-01	89.8%	71.3%
1h7cA00	1.20.58.90	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.52	31.0	3.26e-01	75.9%	63.1%
1lwbA00	1.20.90.10	Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain	0.52	38.0	3.63e-01	81.5%	66.4%
1wcrA00	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.52	33.0	3.42e-01	77.8%	68.0%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3279601	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.69	51.0	4.32e-01	75.9%	68.8%
54287	633.10.1.0 ↗	alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like	0.63	47.0	4.67e-01	79.6%	94.8%
3590444	5081.1.1.1 ↗	alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid	0.62	54.0	4.26e-01	95.4%	71.1%
3275812	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.62	47.0	4.61e-01	79.6%	87.0%
3973500	601.1.2.144 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › HBM	0.54	39.0	3.85e-01	75.9%	86.1%
3600676	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.52	43.0	4.36e-01	94.4%	93.6%
5035115	601.4.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains	0.50	35.0	3.13e-01	72.2%	79.4%