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IMGVR_UViG_3300029930_000698-3300029930-Ga0119944_10014303
Arc-VirIMGVR_UViG_3300029930_000698-3300029930-Ga0119944_10014303
Identity
- Kingdom:
- archaea
Quality
94.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-248
Domain cluster:
rep: IMGVR_UViG_3300028048_000061-3300028048-Ga0256405_1000034383__D5-304
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02811.27 best | PHP | 27.7 | 4.40e-06 | 47.8% | 56.1% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hpiA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.83 | 80.0 | 7.71e-01 | 100.0% | 89.5% |
| 2hnhA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.83 | 79.0 | 7.61e-01 | 100.0% | 89.6% |
| 3f2bA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.81 | 72.0 | 7.16e-01 | 100.0% | 89.2% |
| 6xehA01 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 26.0 | 3.85e-01 | 76.1% | 83.8% |
| 6y1xB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 44.0 | 4.45e-01 | 76.1% | 97.6% |
| 2nw0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 39.0 | 4.44e-01 | 98.8% | 91.0% |
| 1r85A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 52.0 | 4.55e-01 | 100.0% | 94.1% |
| 5xd7A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.56 | 45.0 | 4.62e-01 | 100.0% | 88.4% |
| 2ovlA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.55 | 44.0 | 4.56e-01 | 100.0% | 88.7% |
| 3n0wA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 29.0 | 3.93e-01 | 95.1% | 95.5% |
| 3nbmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 22.0 | 3.42e-01 | 78.9% | 89.4% |
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 42.0 | 4.63e-01 | 98.8% | 98.0% |
| 1fuiA01 | 3.40.50.1070 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 30.0 | 3.54e-01 | 96.4% | 73.1% |
| 3emzA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 51.0 | 4.59e-01 | 100.0% | 94.9% |
| 3lrtA02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 27.0 | 3.65e-01 | 92.3% | 88.6% |
| 3a2kA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 29.0 | 3.80e-01 | 93.1% | 96.3% |
| 2x5eA00 | 3.20.20.370 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase | 0.52 | 41.0 | 4.16e-01 | 100.0% | 83.0% |
| 3cs3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 30.0 | 3.88e-01 | 97.6% | 100.0% |
| 3ctpA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 30.0 | 3.86e-01 | 97.6% | 100.0% |
| 1rliD00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 33.0 | 3.95e-01 | 98.4% | 95.8% |
| 1sgjA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 43.0 | 4.47e-01 | 100.0% | 95.7% |
| 1abeA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 25.0 | 3.28e-01 | 78.9% | 82.6% |
| 4cqbA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 47.0 | 4.43e-01 | 100.0% | 87.7% |
| 3frhA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 33.0 | 3.75e-01 | 95.1% | 86.3% |
| 3c3kA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 29.0 | 3.80e-01 | 97.2% | 100.0% |
| 4g6uA02 | 3.40.1350.110 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.50 | 28.0 | 3.63e-01 | 96.8% | 95.7% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4043425 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.86 | 81.0 | 7.82e-01 | 100.0% | 88.5% |
| 4508942 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.85 | 75.0 | 7.49e-01 | 100.0% | 89.2% |
| 3952074 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 82.0 | 7.55e-01 | 100.0% | 87.0% |
| 4645572 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 74.0 | 7.28e-01 | 100.0% | 85.8% |
| 4226067 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 81.0 | 7.81e-01 | 100.0% | 90.5% |
| 3838289 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 81.0 | 7.62e-01 | 100.0% | 88.3% |
| 4370676 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 77.0 | 7.56e-01 | 100.0% | 89.6% |
| 3969370 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.84 | 73.0 | 7.33e-01 | 100.0% | 89.8% |
| 4081292 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.84 | 73.0 | 7.28e-01 | 100.0% | 88.4% |
| 4106500 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.83 | 73.0 | 7.00e-01 | 100.0% | 81.8% |
| 4402535 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.82 | 73.0 | 7.28e-01 | 100.0% | 89.0% |
| 4042253 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.82 | 75.0 | 7.38e-01 | 100.0% | 89.2% |
| 4176786 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.82 | 79.0 | 7.29e-01 | 100.0% | 91.1% |
| 3941807 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.82 | 79.0 | 7.44e-01 | 100.0% | 88.3% |
| 1392196 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.82 | 77.0 | 7.00e-01 | 100.0% | 76.3% |
| 4240120 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.82 | 75.0 | 7.29e-01 | 100.0% | 88.3% |
| 4405362 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.81 | 73.0 | 7.20e-01 | 100.0% | 88.5% |
| 4139415 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.81 | 78.0 | 7.46e-01 | 100.0% | 89.5% |
| 4385591 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.80 | 74.0 | 7.22e-01 | 100.0% | 89.1% |
| 3291422 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.79 | 76.0 | 7.11e-01 | 100.0% | 87.6% |
| 4144582 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.76 | 73.0 | 6.98e-01 | 100.0% | 89.6% |
| 4145211 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.76 | 63.0 | 6.52e-01 | 100.0% | 89.4% |
| 5026875 | 2002.1.1.77 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RNase_P_p30 | 0.63 | 45.0 | 4.79e-01 | 100.0% | 81.8% |
| 3839796 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 32.0 | 4.29e-01 | 98.0% | 91.5% |
| 5030578 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.60 | 56.0 | 5.38e-01 | 100.0% | 98.2% |
| 4965730 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.58 | 29.0 | 3.85e-01 | 97.6% | 86.9% |
| 5006345 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.58 | 29.0 | 4.01e-01 | 98.0% | 94.4% |
| 5027936 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 29.0 | 4.03e-01 | 99.6% | 97.6% |
| 4286517 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.56 | 25.0 | 3.47e-01 | 78.9% | 82.4% |
| 3729221 | 2002.1.1.18 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_10 | 0.55 | 51.0 | 4.57e-01 | 100.0% | 94.3% |
| 4963305 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.55 | 28.0 | 3.62e-01 | 98.0% | 85.7% |
| 104479 | 2007.2.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red | 0.53 | 32.0 | 3.94e-01 | 98.4% | 94.2% |
| 4241471 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.52 | 27.0 | 3.69e-01 | 100.0% | 96.8% |
| 1252996 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.52 | 28.0 | 3.76e-01 | 95.1% | 96.9% |