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IMGVR_UViG_3300029959_001484-3300029959-Ga0272380_1001361415

Arc-Vir

IMGVR_UViG_3300029959_001484-3300029959-Ga0272380_1001361415

Quality

81.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-51
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07362.19 best CcdA 27.3 5.40e-06 77.5% 45.1%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b28A01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.54 39.0 2.64e-01 77.6% 22.6%
8be0A01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.52 41.0 2.83e-01 93.9% 23.6%
2c42A01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.51 41.0 2.73e-01 100.0% 70.4%
2cdcA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 35.0 2.43e-01 73.5% 40.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4975756 304.103.1.1 a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase 0.57 43.0 2.77e-01 83.7% 19.6%
4930377 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.56 41.0 4.13e-01 89.8% 98.0%
3250773 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.53 40.0 2.88e-01 100.0% 24.4%