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IMGVR_UViG_3300029959_001599-3300029959-Ga0272380_100008366

Arc-Vir

IMGVR_UViG_3300029959_001599-3300029959-Ga0272380_100008366

Identity

Kingdom:
archaea

Quality

72.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-161
PDB
Domain cluster: rep: MK016493.1__AYQ99350.1__PBI_CANTARE_130__00130__D75-228
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03167.26 best UDG 56.7 4.10e-15 88.3% 86.4%
D2 high residues 220-283
PDB
D3 high residues 665-776
PDB
Domain cluster: rep: IMGVR_UViG_3300026311_000146-3300026311-Ga0209723_100647318__D183-300
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14550.12 best Peptidase_S78_2 75.9 4.30e-21 98.2% 91.5%
D4 medium residues 317-396
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d3rA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 50.0 5.02e-01 92.5% 65.1%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 42.0 4.97e-01 76.2% 83.0%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.75 43.0 4.13e-01 72.5% 50.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 40.0 4.52e-01 78.8% 69.4%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 41.0 5.29e-01 80.0% 100.0%
3d31A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 42.0 5.31e-01 73.8% 100.0%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 53.0 5.94e-01 81.2% 100.0%
3aqqA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 54.0 5.03e-01 82.5% 74.7%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 49.0 5.59e-01 78.8% 100.0%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.68 37.0 3.56e-01 81.2% 45.7%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 42.0 4.75e-01 91.3% 82.0%
1v43A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 43.0 4.71e-01 96.2% 79.7%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 38.0 4.57e-01 82.5% 84.9%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 49.0 5.15e-01 77.5% 93.2%
3netB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.67 38.0 3.54e-01 76.2% 45.9%
1bkbA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 51.0 5.62e-01 81.2% 100.0%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 50.0 5.47e-01 81.2% 100.0%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.66 36.0 4.12e-01 77.5% 73.7%
3fvqA03 2.40.50.470 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 40.0 4.60e-01 100.0% 86.2%
1t9hA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 50.0 5.27e-01 81.2% 95.9%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 48.0 5.28e-01 82.5% 100.0%
1u0lA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 46.0 5.13e-01 76.2% 100.0%
8aasC01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 4.33e-01 77.5% 77.5%
2lssA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 48.0 5.04e-01 80.0% 100.0%
2ja9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 4.73e-01 78.8% 100.0%
3go5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 49.0 5.17e-01 87.5% 94.3%
1ixrA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 44.0 4.82e-01 100.0% 95.2%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 43.0 4.65e-01 98.8% 90.8%
1ykdB01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 48.0 3.59e-01 87.5% 35.2%
1smxA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 47.0 4.62e-01 83.7% 95.4%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 45.0 3.91e-01 81.2% 83.6%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 44.0 4.81e-01 80.0% 95.5%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 41.0 4.38e-01 100.0% 88.1%
2bh8B01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 39.0 4.43e-01 86.3% 100.0%
4qmgA02 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 49.0 4.07e-01 93.8% 77.8%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 36.0 4.15e-01 81.2% 86.4%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 37.0 4.11e-01 81.2% 83.9%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 36.0 4.14e-01 78.8% 87.9%
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 36.0 3.51e-01 100.0% 54.3%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 37.0 3.86e-01 82.5% 70.7%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 40.0 4.20e-01 77.5% 79.7%
1wiiA01 2.20.25.190 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 40.0 4.35e-01 93.8% 95.2%
3kf8B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 51.0 4.41e-01 97.5% 75.8%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 37.0 3.77e-01 85.0% 66.7%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 37.0 3.76e-01 82.5% 67.1%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 45.0 3.44e-01 87.5% 44.6%
2x8nA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.56 47.0 4.51e-01 98.8% 84.5%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 43.0 4.16e-01 100.0% 74.4%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 47.0 3.30e-01 98.8% 49.7%
3qr8A01 2.40.50.230 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain 0.55 44.0 4.43e-01 98.8% 84.5%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.55 41.0 3.82e-01 81.2% 98.1%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 41.0 3.62e-01 81.2% 82.0%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 36.0 4.01e-01 87.5% 90.0%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 45.0 3.93e-01 92.5% 95.2%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 39.0 3.94e-01 82.5% 76.9%
4joiC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 48.0 4.25e-01 100.0% 70.3%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 36.0 3.89e-01 81.2% 83.6%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.53 43.0 3.57e-01 85.0% 84.2%
2id0A04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 48.0 4.66e-01 100.0% 95.4%
2vnuD04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 47.0 4.75e-01 96.2% 97.5%
4pmwA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 45.0 4.34e-01 96.2% 96.7%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 41.0 3.23e-01 87.5% 69.0%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3707634 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 40.0 4.78e-01 76.2% 70.9%
3317030 4.1.1.366 ↗ beta barrels › SH3 › SH3 › SH3 › PF26738 0.79 41.0 4.63e-01 80.0% 66.7%
3582536 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 40.0 3.49e-01 78.8% 33.9%
3714156 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 45.0 4.47e-01 87.5% 54.1%
3617355 4.1.1.348 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor, SMN_YG-box 0.77 41.0 3.85e-01 81.2% 43.2%
4972486 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 49.0 5.84e-01 88.7% 94.5%
4105328 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.77 41.0 4.56e-01 81.2% 64.6%
4064354 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.77 39.0 4.51e-01 82.5% 66.7%
5056707 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 49.0 5.75e-01 97.5% 94.5%
4104915 4.1.1.245 ↗ beta barrels › SH3 › SH3 › SH3 › SspH 0.76 40.0 4.59e-01 80.0% 68.3%
4420173 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.74 41.0 4.23e-01 81.2% 57.3%
3555930 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.74 40.0 4.32e-01 80.0% 61.4%
4946166 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 53.0 6.05e-01 82.5% 100.0%
5040535 2.1.1.3 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.73 49.0 5.40e-01 70.0% 100.0%
3237859 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 40.0 4.71e-01 82.5% 78.2%
3243141 2.1.1.270 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RSD-2 0.72 51.0 3.79e-01 73.8% 36.4%
3212056 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 51.0 5.15e-01 73.8% 88.7%
3952480 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.72 39.0 4.85e-01 75.0% 93.3%
4987320 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 51.0 5.76e-01 85.0% 100.0%
4352991 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 51.0 5.75e-01 80.0% 100.0%
4062751 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.70 48.0 5.50e-01 100.0% 95.0%
4978946 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 49.0 5.62e-01 82.5% 98.3%
5003400 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 51.0 4.62e-01 80.0% 58.1%
3383283 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.69 53.0 5.87e-01 83.7% 100.0%
3882067 2.1.1.3 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.69 54.0 4.88e-01 82.5% 72.4%
4950506 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 52.0 4.71e-01 81.2% 60.0%
5057503 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.69 50.0 5.71e-01 75.0% 100.0%
3969528 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 52.0 5.56e-01 80.0% 100.0%
3712451 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 46.0 3.93e-01 92.5% 44.0%
3603358 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 49.0 5.53e-01 76.2% 98.3%
4032291 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.69 49.0 5.36e-01 75.0% 98.5%
3474246 2.1.1.3 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.69 52.0 5.54e-01 80.0% 100.0%
4039724 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.69 50.0 5.46e-01 76.2% 98.5%
4027685 2.1.1.3 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.68 52.0 5.25e-01 81.2% 91.3%
4399115 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.68 51.0 5.66e-01 80.0% 100.0%
4184764 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.68 51.0 5.63e-01 82.5% 98.5%
4050524 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.68 52.0 5.66e-01 81.2% 100.0%
4252940 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.68 49.0 5.34e-01 76.2% 95.4%
4250239 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.67 51.0 5.61e-01 82.5% 98.5%
3588266 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 5.29e-01 81.2% 96.7%
3317544 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.67 51.0 5.55e-01 83.7% 98.5%
4966111 2.1.1.378 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26006 0.67 48.0 5.02e-01 76.2% 100.0%
3926375 2.1.1.3 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.67 52.0 5.27e-01 83.7% 98.8%
4043601 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.67 51.0 5.57e-01 83.7% 100.0%
4218525 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 49.0 5.39e-01 100.0% 95.4%
4425795 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.67 48.0 5.26e-01 76.2% 100.0%
4100221 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.67 50.0 5.46e-01 80.0% 96.9%
None — 0.66 50.0 5.30e-01 80.0% 100.0%
3591158 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 53.0 4.56e-01 86.3% 80.8%
4670334 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.66 50.0 5.49e-01 80.0% 100.0%
4678731 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.66 50.0 5.45e-01 82.5% 98.5%
4945673 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.66 50.0 5.52e-01 80.0% 100.0%
None — 0.65 52.0 5.15e-01 86.3% 90.6%
4358761 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.65 50.0 5.47e-01 82.5% 100.0%
3227102 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 48.0 5.09e-01 77.5% 92.9%
4119533 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.65 47.0 5.28e-01 75.0% 100.0%
3838464 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.65 49.0 5.35e-01 81.2% 98.5%
4167626 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.65 50.0 5.43e-01 81.2% 100.0%
3970047 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 47.0 5.03e-01 77.5% 98.6%
3587502 2.1.1.38 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.65 49.0 5.12e-01 81.2% 94.7%
4870003 2.1.1.3 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.65 51.0 4.92e-01 86.3% 92.4%
3511418 2.1.1.38 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_RNB 0.65 49.0 5.16e-01 80.0% 97.1%
4582456 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.65 49.0 5.23e-01 82.5% 98.6%
4168836 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.63 47.0 5.02e-01 80.0% 94.3%
3708593 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 52.0 4.57e-01 87.5% 93.9%
340344 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.63 40.0 3.45e-01 82.5% 42.5%
3232046 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 48.0 4.06e-01 81.2% 53.8%
4453243 2.1.1.219 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 0.62 48.0 4.75e-01 82.5% 98.8%
3948516 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.62 45.0 4.91e-01 77.5% 100.0%
4954679 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 47.0 5.05e-01 92.5% 92.9%
5037218 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 41.0 4.02e-01 73.8% 61.1%
3356732 2.1.1.67 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.61 46.0 4.08e-01 81.2% 77.5%
3599155 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.61 41.0 3.19e-01 70.0% 61.7%
4142920 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.59 48.0 4.43e-01 87.5% 91.0%
4289792 2.14.1.1 ↗ beta barrels › OB-fold › HupF/HypC-like › HupF/HypC-like › HupF_HypC 0.57 40.0 4.25e-01 77.5% 85.7%
3259547 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 41.0 3.60e-01 75.0% 97.4%
3481726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 37.0 4.18e-01 82.5% 91.7%
3277340 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.56 45.0 3.65e-01 90.0% 74.4%
3699623 2.1.1.43 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 0.56 45.0 4.19e-01 98.8% 68.6%
4994226 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 50.0 4.28e-01 100.0% 74.4%
3961639 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.54 38.0 4.16e-01 83.7% 98.3%
4990974 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 44.0 4.36e-01 96.2% 82.4%
3704298 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.53 46.0 4.12e-01 98.8% 87.8%
3866038 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.53 40.0 3.94e-01 78.8% 90.6%
4180663 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.52 47.0 4.01e-01 98.8% 98.4%
3672445 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 41.0 3.33e-01 85.0% 69.7%
3386124 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.51 40.0 4.03e-01 96.2% 83.7%
4108015 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.51 46.0 3.93e-01 98.8% 96.1%
5006353 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.51 47.0 4.28e-01 100.0% 76.2%
5072315 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.51 45.0 3.91e-01 97.5% 93.5%
5017478 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.51 44.0 4.39e-01 100.0% 90.6%
D5 medium residues 499-536_570-662
PDB
Domain cluster: rep: IMGVR_UViG_3300025471_000009-3300025471-Ga0209508_100072430__D782-797_909-927_941-997
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.56 31.0 4.03e-01 71.0% 97.2%
2gfgA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.54 40.0 3.49e-01 76.3% 98.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4017732 220.1.1.202 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N 0.51 36.0 3.46e-01 71.8% 70.0%
3955095 881.1.1.8 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C 0.50 35.0 3.09e-01 71.0% 68.3%
3201065 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.50 30.0 2.56e-01 70.2% 34.0%