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IMGVR_UViG_3300029959_001612-3300029959-Ga0272380_1000280741
Arc-VirIMGVR_UViG_3300029959_001612-3300029959-Ga0272380_1000280741
Identity
- Kingdom:
- archaea
Quality
88.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-86
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05854.17 best | MC1 | 121.2 | 2.50e-35 | 100.0% | 95.8% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5go5A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.59 | 52.0 | 4.27e-01 | 100.0% | 89.5% |
| 5gm0A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 35.0 | 2.89e-01 | 98.8% | 33.1% |
| 3f1sB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 50.0 | 4.83e-01 | 97.6% | 86.0% |
| 3rtyB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 44.0 | 4.04e-01 | 98.8% | 63.3% |
| 2ou5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 50.0 | 3.93e-01 | 100.0% | 69.7% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 48.0 | 4.16e-01 | 100.0% | 82.2% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 48.0 | 4.04e-01 | 100.0% | 77.5% |
| 4fmrA02 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.53 | 36.0 | 3.53e-01 | 97.6% | 64.8% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 43.0 | 3.69e-01 | 100.0% | 76.4% |
| 4gb5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 38.0 | 3.21e-01 | 82.9% | 85.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959201 | 815.1.1.1 ↗ | a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 › MC1 | 0.96 | 92.0 | 8.63e-01 | 100.0% | 93.7% |
| 5070582 | 815.1.1.0 ↗ | a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 | 0.90 | 85.0 | 8.38e-01 | 98.8% | 98.8% |
| 5018703 | 815.1.1.0 ↗ | a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 | 0.73 | 63.0 | 6.15e-01 | 93.9% | 100.0% |
| 4950250 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.63 | 53.0 | 4.52e-01 | 98.8% | 57.7% |
| 3384583 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.56 | 44.0 | 2.82e-01 | 100.0% | 17.3% |
| 3858437 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.55 | 48.0 | 3.63e-01 | 96.3% | 41.5% |
| 3440037 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 45.0 | 2.90e-01 | 90.2% | 85.8% |
| 3967781 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 46.0 | 3.79e-01 | 100.0% | 68.8% |
| 4021761 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 48.0 | 2.93e-01 | 100.0% | 28.8% |
| 3729739 | 2008.1.1.143 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 | 0.53 | 46.0 | 3.21e-01 | 100.0% | 87.9% |
| 3273636 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.51 | 34.0 | 3.78e-01 | 80.5% | 87.7% |
| 3518499 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 44.0 | 3.11e-01 | 100.0% | 43.9% |
| 3182983 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.50 | 44.0 | 2.84e-01 | 100.0% | 39.0% |
| 3193239 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.50 | 44.0 | 2.78e-01 | 100.0% | 33.6% |