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IMGVR_UViG_3300030097_000534-3300030097-Ga0183658_100013655
Arc-VirIMGVR_UViG_3300030097_000534-3300030097-Ga0183658_100013655
Identity
- Kingdom:
- archaea
Quality
65.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-89
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8alzB05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 53.0 | 3.68e-01 | 100.0% | 67.8% |
| 5agaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 50.0 | 3.51e-01 | 98.1% | 65.8% |
| 3f9tA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.58 | 48.0 | 3.14e-01 | 96.2% | 52.5% |
| 5supC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 46.0 | 3.25e-01 | 100.0% | 42.3% |
| 3tshA01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.56 | 43.0 | 3.56e-01 | 84.9% | 47.5% |
| 4ljyA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 46.0 | 3.08e-01 | 100.0% | 35.8% |
| 3ky8A01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.56 | 45.0 | 3.34e-01 | 100.0% | 57.5% |
| 4ud8B01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.56 | 41.0 | 3.40e-01 | 83.0% | 88.0% |
| 1hq0A00 | 3.60.100.10 | Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain | 0.56 | 46.0 | 2.91e-01 | 96.2% | 43.7% |
| 1vecA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 42.0 | 3.03e-01 | 96.2% | 52.4% |
| 5d79B01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.54 | 41.0 | 3.51e-01 | 84.9% | 50.5% |
| 1wvfA01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.54 | 41.0 | 3.35e-01 | 86.8% | 43.5% |
| 1i19A01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.54 | 40.0 | 3.67e-01 | 84.9% | 64.5% |
| 3fw7A01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.53 | 41.0 | 3.37e-01 | 86.8% | 44.7% |
| 2r0bA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 41.0 | 3.09e-01 | 90.6% | 58.3% |
| 1np6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 39.0 | 2.98e-01 | 83.0% | 65.4% |
| 4dzrA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 42.0 | 3.12e-01 | 96.2% | 71.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3896497 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.59 | 46.0 | 3.09e-01 | 94.3% | 34.5% |
| 4273731 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.58 | 48.0 | 3.14e-01 | 100.0% | 32.0% |
| 3955594 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.58 | 46.0 | 3.44e-01 | 100.0% | 58.2% |
| 3458811 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.57 | 46.0 | 3.21e-01 | 90.6% | 27.2% |
| 3585169 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.57 | 45.0 | 3.09e-01 | 100.0% | 38.3% |
| 4049592 | 2003.6.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › HK | 0.53 | 40.0 | 2.70e-01 | 96.2% | 60.2% |
| 3536961 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 38.0 | 3.58e-01 | 90.6% | 81.3% |
| 4934216 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.51 | 35.0 | 2.81e-01 | 75.5% | 90.0% |