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IMGVR_UViG_3300030335_000007-3300030335-Ga0188177_103556
Arc-VirIMGVR_UViG_3300030335_000007-3300030335-Ga0188177_103556
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 263-339_409-473
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1neiA00 | 3.30.160.220 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG | 0.70 | 18.0 | 2.97e-01 | 73.2% | 56.7% |
| 2bm0A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.59 | 19.0 | 3.03e-01 | 88.0% | 72.5% |
| 3shtA02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.57 | 26.0 | 3.10e-01 | 100.0% | 62.2% |
| 6bogA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 4.21e-01 | 95.1% | 97.6% |
| 4n40A02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.55 | 28.0 | 3.31e-01 | 100.0% | 71.1% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.54 | 22.0 | 2.96e-01 | 97.2% | 68.4% |
| 4a15A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 49.0 | 4.44e-01 | 100.0% | 90.6% |
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 25.0 | 3.48e-01 | 97.2% | 96.8% |
| 2vl7A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 48.0 | 4.46e-01 | 100.0% | 99.4% |
| 4ij5A00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.51 | 46.0 | 4.08e-01 | 100.0% | 93.8% |
| 5hj7A01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 35.0 | 3.54e-01 | 100.0% | 69.7% |
| 2yjtD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 46.0 | 4.37e-01 | 100.0% | 94.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3645870 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 43.0 | 4.49e-01 | 100.0% | 65.4% |
| 5018200 | 2004.1.1.220 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 | 0.61 | 56.0 | 3.79e-01 | 100.0% | 43.7% |
| 5017780 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.60 | 56.0 | 4.30e-01 | 100.0% | 93.8% |
| 4004522 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.59 | 49.0 | 3.53e-01 | 89.4% | 60.8% |
| 3609158 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.55 | 51.0 | 4.41e-01 | 100.0% | 90.2% |
| 4995768 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.55 | 48.0 | 4.17e-01 | 94.4% | 96.4% |
| 1504771 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.53 | 39.0 | 4.21e-01 | 99.3% | 93.9% |
| 3238719 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.53 | 48.0 | 4.32e-01 | 99.3% | 87.7% |
| 3594626 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 45.0 | 4.22e-01 | 100.0% | 75.4% |
| 3677992 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.52 | 45.0 | 4.12e-01 | 100.0% | 71.4% |
| 4021671 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.52 | 48.0 | 4.04e-01 | 100.0% | 76.2% |
| 4537352 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.51 | 30.0 | 2.94e-01 | 83.8% | 49.4% |
| 3402804 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.51 | 37.0 | 2.97e-01 | 74.6% | 80.4% |
| 3186226 | 7527.1.1.1 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE | 0.51 | 35.0 | 2.66e-01 | 70.4% | 55.4% |
| 1148930 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.50 | 31.0 | 3.15e-01 | 100.0% | 60.3% |
| 3630185 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.50 | 46.0 | 3.99e-01 | 100.0% | 71.8% |
| 3719265 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.50 | 46.0 | 3.86e-01 | 100.0% | 72.1% |
D2
medium
residues 11-98
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qhhA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 46.0 | 3.75e-01 | 78.4% | 49.4% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.59 | 43.0 | 3.95e-01 | 76.1% | 74.6% |
| 5g5gA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.57 | 44.0 | 4.39e-01 | 83.0% | 100.0% |
| 1iqpA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 33.0 | 3.77e-01 | 85.2% | 82.8% |
| 6vvoC02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 33.0 | 3.78e-01 | 84.1% | 84.4% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.53 | 43.0 | 3.84e-01 | 87.5% | 75.8% |
| 1sxjD02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 34.0 | 3.76e-01 | 84.1% | 85.7% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 35.0 | 3.48e-01 | 71.6% | 78.9% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3600773 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.55 | 42.0 | 2.92e-01 | 81.8% | 62.3% |
| 3457663 | 192.29.1.178 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF28703 | 0.55 | 38.0 | 3.64e-01 | 71.6% | 70.5% |
| 3178208 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.55 | 45.0 | 3.67e-01 | 92.0% | 83.4% |
| 3547209 | 192.15.1.204 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF2678 | 0.55 | 39.0 | 3.75e-01 | 73.9% | 76.0% |
| 3199087 | 5038.2.1.1 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG | 0.55 | 41.0 | 3.56e-01 | 80.7% | 87.1% |
| 3630322 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.54 | 40.0 | 2.56e-01 | 81.8% | 40.4% |
| 5023614 | 632.12.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Vng1086c-like › Vng1086c-like › UPF0058 | 0.54 | 44.0 | 4.29e-01 | 90.9% | 91.0% |
| 3588508 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.53 | 40.0 | 3.90e-01 | 83.0% | 76.0% |
| 4296017 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.52 | 37.0 | 3.26e-01 | 73.9% | 69.2% |
D3
medium
residues 99-255
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04851.22 best | ResIII | 41.9 | 1.40e-10 | 86.6% | 68.3% |
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8ebtA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.78 | 67.0 | 6.41e-01 | 98.7% | 79.3% |
| 6jimB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 50.0 | 5.26e-01 | 97.5% | 77.6% |
| 1j5xA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.72 | 44.0 | 4.48e-01 | 96.2% | 62.7% |
| 2amlA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.71 | 46.0 | 4.76e-01 | 97.5% | 69.4% |
| 3mwyW03 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.69 | 66.0 | 5.36e-01 | 100.0% | 89.6% |
| 2v1xA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 64.0 | 5.60e-01 | 98.7% | 70.5% |
| 2fwrA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 65.0 | 6.16e-01 | 100.0% | 96.6% |
| 3euaF01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.67 | 47.0 | 4.75e-01 | 99.4% | 71.2% |
| 2zj3A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.67 | 45.0 | 4.64e-01 | 96.8% | 71.6% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 36.0 | 4.23e-01 | 82.2% | 77.3% |
| 3upuA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 50.0 | 4.80e-01 | 100.0% | 73.3% |
| 2b4yA01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.60 | 48.0 | 4.94e-01 | 96.2% | 86.8% |
| 1jbkA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 48.0 | 4.53e-01 | 84.7% | 74.1% |
| 1w36D02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 53.0 | 4.59e-01 | 95.5% | 65.4% |
| 3lm7A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 48.0 | 4.16e-01 | 87.3% | 92.0% |
| 1pjrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 53.0 | 4.81e-01 | 95.5% | 75.7% |
| 2k0zA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.59 | 33.0 | 3.78e-01 | 93.6% | 74.5% |
| 3qi7A01 | 3.40.50.11400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 44.0 | 4.53e-01 | 94.3% | 84.1% |
| 2b8tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 41.0 | 4.36e-01 | 94.9% | 81.3% |
| 1puiA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 4.58e-01 | 93.0% | 78.7% |
| 2a3nA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 41.0 | 4.13e-01 | 95.5% | 70.8% |
| 1d7aA00 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 42.0 | 4.16e-01 | 95.5% | 72.0% |
| 2pgeA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 47.0 | 4.20e-01 | 89.2% | 90.4% |
| 3px5A02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 47.0 | 4.08e-01 | 89.2% | 85.4% |
| 3pvsB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 40.0 | 4.12e-01 | 81.5% | 75.5% |
| 1sulB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 51.0 | 4.78e-01 | 98.7% | 82.1% |
| 2y6uA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 49.0 | 3.82e-01 | 94.3% | 75.6% |
| 6pwkA02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.57 | 45.0 | 3.98e-01 | 84.1% | 97.0% |
| 2khzA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 43.0 | 4.33e-01 | 93.6% | 77.3% |
| 3nl6C02 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.56 | 51.0 | 4.16e-01 | 99.4% | 69.0% |
| 1qo2A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 47.0 | 4.12e-01 | 90.4% | 90.8% |
| 2z4tA02 | 3.40.50.11120 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sialyltransferase, N-terminal GT-B Rossman nucleotide-binding domain | 0.56 | 49.0 | 4.37e-01 | 95.5% | 90.7% |
| 4tkzA00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.56 | 44.0 | 4.76e-01 | 100.0% | 99.2% |
| 4cidA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 48.0 | 4.28e-01 | 95.5% | 99.1% |
| 1vcfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 48.0 | 3.92e-01 | 94.9% | 71.1% |
| 4idhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 4.23e-01 | 91.1% | 94.7% |
| 1kicB00 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.55 | 48.0 | 3.82e-01 | 94.3% | 95.2% |
| 1gq6B00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.55 | 47.0 | 3.89e-01 | 96.2% | 74.8% |
| 1qydA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 48.0 | 4.48e-01 | 93.6% | 96.9% |
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 32.0 | 3.26e-01 | 84.1% | 56.6% |
| 1d8cA01 | 3.20.20.360 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Malate synthase, domain 3 | 0.55 | 48.0 | 3.51e-01 | 96.8% | 69.1% |
| 3qkwB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 47.0 | 4.61e-01 | 96.2% | 89.1% |
| 5dn8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 4.43e-01 | 94.9% | 85.3% |
| 4kfuA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 48.0 | 4.39e-01 | 97.5% | 100.0% |
| 3n0xA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 45.0 | 4.47e-01 | 96.8% | 86.0% |
| 7vc6A02 | 3.40.50.1700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain | 0.53 | 45.0 | 4.12e-01 | 91.1% | 83.1% |
| 5mn7A01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.53 | 47.0 | 4.70e-01 | 97.5% | 98.2% |
| 5izlA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 47.0 | 4.47e-01 | 96.2% | 86.3% |
| 8jj7A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 45.0 | 3.66e-01 | 93.6% | 86.6% |
| 3cerC01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 36.0 | 3.97e-01 | 84.1% | 85.9% |
| 3ksrA02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 47.0 | 4.24e-01 | 98.7% | 90.7% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.52 | 42.0 | 3.25e-01 | 87.9% | 85.9% |
| 3tmaA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 44.0 | 4.27e-01 | 98.7% | 80.2% |
| 2orwB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 4.41e-01 | 82.2% | 100.0% |
| 3h5lA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 44.0 | 3.94e-01 | 93.6% | 99.1% |
| 1e3jA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 40.0 | 4.19e-01 | 95.5% | 92.0% |
| 1u04A03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 39.0 | 3.76e-01 | 94.9% | 69.1% |
| 2wueA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 44.0 | 3.70e-01 | 94.3% | 81.3% |
| 3mdqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 36.0 | 3.93e-01 | 85.4% | 90.2% |
| 2vatL00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 46.0 | 3.60e-01 | 99.4% | 81.8% |
| 3h05B00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 38.0 | 3.77e-01 | 84.1% | 74.8% |
| 3do6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 42.0 | 3.46e-01 | 92.4% | 79.4% |
| 6i3mE02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.50 | 45.0 | 4.15e-01 | 98.1% | 94.0% |
| 3a06B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 41.0 | 4.31e-01 | 95.5% | 98.6% |
| 6jqlA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.50 | 45.0 | 4.05e-01 | 98.7% | 75.2% |
| 7pt4A01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.50 | 40.0 | 3.76e-01 | 96.2% | 69.1% |
| 1egaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 43.0 | 4.18e-01 | 95.5% | 81.8% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838583 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.78 | 74.0 | 6.27e-01 | 100.0% | 66.7% |
| 3987551 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.78 | 67.0 | 6.08e-01 | 100.0% | 69.3% |
| 3210633 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.73 | 69.0 | 5.35e-01 | 100.0% | 62.5% |
| 3999609 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.73 | 69.0 | 5.57e-01 | 100.0% | 79.3% |
| 4965162 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.72 | 64.0 | 5.89e-01 | 99.4% | 73.5% |
| 3209152 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.72 | 68.0 | 4.35e-01 | 100.0% | 30.2% |
| 3607483 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.72 | 68.0 | 4.28e-01 | 100.0% | 29.7% |
| 3592265 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 67.0 | 5.40e-01 | 98.7% | 77.2% |
| 3602924 | 2004.1.1.220 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 | 0.72 | 68.0 | 5.65e-01 | 100.0% | 71.0% |
| 5017779 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.72 | 65.0 | 5.91e-01 | 96.2% | 73.2% |
| 5021937 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.72 | 63.0 | 6.20e-01 | 94.3% | 87.3% |
| 1107955 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.72 | 44.0 | 4.36e-01 | 96.2% | 58.4% |
| 3273397 | 2004.1.1.629 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom, Helicase_C, ResIII | 0.71 | 68.0 | 4.34e-01 | 100.0% | 28.5% |
| 3689945 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.71 | 67.0 | 5.14e-01 | 100.0% | 60.4% |
| 3683743 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.71 | 67.0 | 5.14e-01 | 100.0% | 71.2% |
| 5048279 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.71 | 66.0 | 5.40e-01 | 98.7% | 79.6% |
| 4986546 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.71 | 60.0 | 5.50e-01 | 91.1% | 69.5% |
| 4158799 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.71 | 38.0 | 4.62e-01 | 82.8% | 80.0% |
| 3711469 | 2004.1.1.24 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom,Helicase_C | 0.71 | 67.0 | 4.17e-01 | 100.0% | 26.7% |
| 3781041 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.71 | 67.0 | 5.54e-01 | 100.0% | 66.5% |
| 4025948 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.71 | 65.0 | 5.57e-01 | 98.1% | 64.7% |
| 3699008 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.71 | 66.0 | 5.52e-01 | 100.0% | 79.2% |
| 5049581 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.71 | 66.0 | 5.23e-01 | 98.7% | 82.0% |
| 3489612 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.71 | 64.0 | 5.13e-01 | 96.2% | 60.0% |
| None | — | 0.70 | 66.0 | 5.76e-01 | 99.4% | 70.2% | |
| 4945331 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.70 | 65.0 | 5.22e-01 | 96.8% | 77.9% |
| 3603150 | 2004.1.1.220 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 | 0.70 | 66.0 | 5.73e-01 | 100.0% | 70.4% |
| 3649222 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.70 | 67.0 | 4.96e-01 | 100.0% | 54.4% |
| 4937096 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.70 | 64.0 | 5.29e-01 | 96.2% | 80.0% |
| 4012285 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.70 | 66.0 | 5.36e-01 | 100.0% | 66.2% |
| 3598241 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 66.0 | 5.18e-01 | 100.0% | 61.3% |
| 5030397 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.70 | 63.0 | 5.23e-01 | 96.8% | 81.9% |
| 4979474 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 65.0 | 5.35e-01 | 98.7% | 80.4% |
| 5037418 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.69 | 63.0 | 5.16e-01 | 96.8% | 78.2% |
| 5069049 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.69 | 65.0 | 5.29e-01 | 100.0% | 81.8% |
| 5006201 | 2004.1.1.220 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 | 0.69 | 64.0 | 5.58e-01 | 100.0% | 68.0% |
| 3424257 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.69 | 65.0 | 4.54e-01 | 100.0% | 43.4% |
| 5004545 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.69 | 65.0 | 4.35e-01 | 100.0% | 38.4% |
| 3237175 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.69 | 65.0 | 5.64e-01 | 100.0% | 68.3% |
| 3642727 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.69 | 65.0 | 5.00e-01 | 100.0% | 73.0% |
| None | — | 0.69 | 63.0 | 5.40e-01 | 96.8% | 64.2% | |
| 5054851 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.69 | 63.0 | 5.05e-01 | 96.2% | 80.4% |
| 4965444 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.69 | 62.0 | 5.08e-01 | 94.9% | 76.7% |
| 5002089 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.69 | 62.0 | 4.86e-01 | 95.5% | 82.9% |
| 4997185 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.69 | 64.0 | 5.16e-01 | 98.1% | 78.2% |
| 3604486 | 2004.1.1.796 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, Cas3-like_C_2 | 0.69 | 64.0 | 4.55e-01 | 100.0% | 63.3% |
| 5038713 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.69 | 64.0 | 5.16e-01 | 98.7% | 74.6% |
| 5046185 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.69 | 64.0 | 4.38e-01 | 100.0% | 45.6% |
| 5067389 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.68 | 62.0 | 5.01e-01 | 96.2% | 77.9% |
| 4547621 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.68 | 45.0 | 4.40e-01 | 96.8% | 60.6% |
| 3700756 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.67 | 44.0 | 4.59e-01 | 95.5% | 71.0% |
| 5071556 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.67 | 62.0 | 5.30e-01 | 100.0% | 72.2% |
| 4938435 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.67 | 61.0 | 5.25e-01 | 99.4% | 69.8% |
| 4946383 | 2004.1.1.233 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 | 0.66 | 62.0 | 4.37e-01 | 100.0% | 78.9% |
| 4116384 | 2495.1.1.0 ↗ | a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain | 0.64 | 31.0 | 4.32e-01 | 83.4% | 98.6% |
| 5082473 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 59.0 | 5.10e-01 | 100.0% | 96.2% |
| 4628796 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.60 | 47.0 | 4.73e-01 | 100.0% | 81.9% |
| None | — | 0.59 | 51.0 | 4.39e-01 | 93.6% | 85.2% | |
| 5051568 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 44.0 | 4.12e-01 | 98.7% | 63.1% |
| 4182424 | 2004.1.1.360 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NTE_Ploop | 0.58 | 52.0 | 4.95e-01 | 95.5% | 86.1% |
| 4021227 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.57 | 46.0 | 3.99e-01 | 84.1% | 69.6% |
| 3588520 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.57 | 41.0 | 4.15e-01 | 95.5% | 74.2% |
| 3184531 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.56 | 44.0 | 3.96e-01 | 83.4% | 76.4% |
| 4308654 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.56 | 49.0 | 4.49e-01 | 94.3% | 74.1% |
| 1718585 | 7512.1.1.29 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › PM0188 | 0.56 | 49.0 | 4.36e-01 | 96.2% | 91.1% |
| 5077198 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.55 | 48.0 | 4.49e-01 | 94.3% | 80.0% |
| 4936276 | 3979.1.1.0 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain | 0.55 | 24.0 | 3.43e-01 | 79.6% | 93.8% |
| 3558554 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.54 | 48.0 | 4.27e-01 | 95.5% | 81.4% |
| 4027928 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.54 | 47.0 | 4.22e-01 | 96.2% | 89.5% |
| 3969016 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.53 | 48.0 | 4.14e-01 | 98.7% | 89.2% |
| 2512657 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.53 | 43.0 | 4.33e-01 | 98.7% | 86.2% |
| 4990783 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 47.0 | 4.28e-01 | 98.7% | 73.1% |
| 3951812 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.53 | 45.0 | 3.69e-01 | 93.6% | 76.5% |
| 3959124 | 2003.2.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 | 0.52 | 36.0 | 4.15e-01 | 79.6% | 100.0% |
| 3974155 | 7579.1.1.99 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4, Abhydrolase_6 | 0.52 | 46.0 | 3.80e-01 | 96.8% | 77.6% |
| 3956046 | 2003.1.1.85 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SpnB_Rossmann | 0.52 | 45.0 | 4.04e-01 | 93.6% | 76.8% |
| 3183192 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.52 | 43.0 | 3.79e-01 | 88.5% | 89.6% |
| 3682936 | 2003.1.14.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace_N | 0.52 | 39.0 | 3.82e-01 | 100.0% | 72.6% |
| 3947532 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.51 | 37.0 | 4.14e-01 | 84.7% | 100.0% |
| 3607094 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.51 | 39.0 | 3.40e-01 | 82.2% | 68.5% |
| 3952641 | 2484.1.1.194 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 | 0.51 | 34.0 | 3.15e-01 | 85.4% | 52.8% |
| 4983747 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.50 | 45.0 | 4.03e-01 | 98.7% | 86.7% |
| 4004363 | 2002.4.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › Nicotinate/Quinolinate PRTase C-terminal domain-like › Nicotinate/Quinolinate PRTase C-terminal domain-like › NAPRTase | 0.50 | 39.0 | 3.35e-01 | 81.5% | 68.2% |
D4
medium
residues 523-542_582-670
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 38.0 | 4.07e-01 | 70.6% | 62.9% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.65 | 40.0 | 3.28e-01 | 75.2% | 33.7% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 40.0 | 4.12e-01 | 72.5% | 64.1% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.59 | 41.0 | 4.54e-01 | 77.1% | 95.1% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 44.0 | 4.18e-01 | 78.9% | 91.7% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 44.0 | 4.08e-01 | 79.8% | 86.4% |
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.58 | 44.0 | 4.06e-01 | 81.7% | 86.1% |
| 1yz6A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.58 | 36.0 | 3.98e-01 | 71.6% | 78.2% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 43.0 | 3.98e-01 | 79.8% | 81.1% |
| 2lyiA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.57 | 47.0 | 4.23e-01 | 89.9% | 64.9% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 38.0 | 3.94e-01 | 79.8% | 74.5% |
| 3t4rA00 | 1.20.120.1590 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 33.0 | 3.99e-01 | 70.6% | 93.1% |
| 7ahdC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 36.0 | 2.80e-01 | 72.5% | 30.7% |
| 3h3mA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.54 | 32.0 | 3.45e-01 | 94.5% | 69.7% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.54 | 30.0 | 3.35e-01 | 92.7% | 69.4% |
| 7dd0C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 37.0 | 2.95e-01 | 73.4% | 40.5% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.53 | 29.0 | 3.26e-01 | 90.8% | 68.3% |
| 4lqkA00 | 1.10.437.20 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus | 0.52 | 36.0 | 3.43e-01 | 70.6% | 90.2% |
| 1vplA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.98e-01 | 77.1% | 52.9% |
| 2cdqA02 | 1.20.120.1320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain | 0.51 | 36.0 | 3.74e-01 | 72.5% | 89.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3783607 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.61 | 53.0 | 4.75e-01 | 96.3% | 96.1% |
| 3703267 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.59 | 45.0 | 4.37e-01 | 79.8% | 94.2% |
| 3949475 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.59 | 50.0 | 4.02e-01 | 91.7% | 91.4% |
| 4931613 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.58 | 43.0 | 3.62e-01 | 78.0% | 97.9% |
| 3804600 | 304.20.1.5 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f | 0.57 | 42.0 | 3.28e-01 | 78.0% | 84.8% |
| 5067158 | 4044.1.1.0 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins | 0.57 | 41.0 | 3.47e-01 | 75.2% | 88.1% |
| 3490409 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.57 | 40.0 | 3.23e-01 | 74.3% | 76.5% |
| 3322834 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.56 | 42.0 | 3.27e-01 | 78.0% | 88.3% |
| 4946961 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.56 | 36.0 | 3.92e-01 | 71.6% | 77.8% |
| 5051911 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 38.0 | 2.88e-01 | 70.6% | 27.3% |
| 3512415 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.55 | 39.0 | 3.36e-01 | 73.4% | 72.0% |
| 3719607 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.54 | 42.0 | 3.72e-01 | 84.4% | 92.7% |
| 5039200 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.53 | 36.0 | 2.85e-01 | 72.5% | 30.6% |
| 4296281 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.53 | 38.0 | 2.85e-01 | 74.3% | 56.3% |
| 3735275 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.52 | 38.0 | 3.20e-01 | 76.1% | 90.0% |
| 5017875 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.51 | 37.0 | 3.32e-01 | 89.0% | 51.9% |
| 2329732 | 3718.1.1.1 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT | 0.50 | 38.0 | 3.53e-01 | 81.7% | 67.4% |