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IMGVR_UViG_3300030493_000264-3300030493-Ga0310040_10009907
Arc-VirIMGVR_UViG_3300030493_000264-3300030493-Ga0310040_10009907
Identity
- Kingdom:
- archaea
Quality
74.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 226-273
D2
medium
residues 1-26_66-125_157-225
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 34.0 | 3.57e-01 | 74.8% | 57.7% |
| 4hj1B03 | 2.60.40.3770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 32.0 | 4.05e-01 | 96.1% | 87.8% |
| 1tp6A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 32.0 | 3.50e-01 | 72.3% | 65.9% |
| 2f86B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 32.0 | 3.45e-01 | 71.0% | 66.7% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.54 | 26.0 | 3.59e-01 | 79.4% | 90.9% |
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 29.0 | 3.59e-01 | 74.8% | 83.7% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 31.0 | 3.59e-01 | 76.1% | 81.1% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 35.0 | 3.94e-01 | 81.9% | 87.0% |
| 1d7bA00 | 2.60.40.1210 | Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain | 0.51 | 37.0 | 3.54e-01 | 75.5% | 77.3% |
| 1na8B00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.51 | 34.0 | 3.57e-01 | 74.8% | 73.1% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.50 | 36.0 | 3.88e-01 | 96.8% | 85.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4017102 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.60 | 38.0 | 4.25e-01 | 74.8% | 79.2% |
| 5005862 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.57 | 36.0 | 4.00e-01 | 79.4% | 78.4% |
| 3699834 | 9.2.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin | 0.55 | 35.0 | 3.93e-01 | 89.7% | 80.0% |
| 1760251 | 11.1.1.348 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BARF1_ig2 | 0.55 | 27.0 | 3.30e-01 | 81.3% | 71.4% |
| 4926981 | 9.13.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like | 0.52 | 35.0 | 3.86e-01 | 89.7% | 84.8% |
| 3948878 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 33.0 | 3.68e-01 | 77.4% | 80.0% |
| 3192440 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 32.0 | 3.69e-01 | 97.4% | 87.3% |
| 3971060 | 11.1.1.51 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 | 0.51 | 36.0 | 3.92e-01 | 98.1% | 86.9% |
| 3247589 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.50 | 33.0 | 3.61e-01 | 83.2% | 78.2% |
D3
medium
residues 27-65_126-156
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fhzA00 | 3.30.190.30 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › | 0.55 | 43.0 | 3.81e-01 | 85.7% | 99.1% |
| 4cujA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 36.0 | 3.01e-01 | 74.3% | 88.7% |
| 1vwxZ00 | 2.30.30.770 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 3.40e-01 | 91.4% | 94.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5053690 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.60 | 51.0 | 3.99e-01 | 97.1% | 56.5% |
| None | — | 0.53 | 33.0 | 3.38e-01 | 95.7% | 64.1% | |
| 4967335 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.53 | 45.0 | 4.33e-01 | 100.0% | 100.0% |
| 3918163 | 304.20.1.1 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind | 0.53 | 45.0 | 3.65e-01 | 97.1% | 81.4% |
| 3506832 | 304.20.1.1 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind | 0.53 | 45.0 | 3.77e-01 | 98.6% | 86.2% |
| 1697173 | 107.1.1.0 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c | 0.52 | 41.0 | 3.27e-01 | 91.4% | 88.5% |