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IMGVR_UViG_3300030493_000405-3300030493-Ga0310040_100017083
Arc-VirIMGVR_UViG_3300030493_000405-3300030493-Ga0310040_100017083
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-82
Domain cluster:
rep: MF001358.1__ASZ76771.1__X__00105__D7-99
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF15738.12 best | YafQ_toxin | 30.4 | 5.70e-07 | 98.7% | 83.0% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cegD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.91 | 87.0 | 7.87e-01 | 100.0% | 90.1% |
| 6n90A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.91 | 85.0 | 8.19e-01 | 100.0% | 96.6% |
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.90 | 83.0 | 7.97e-01 | 100.0% | 88.5% |
| 3kxeA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.88 | 83.0 | 7.78e-01 | 100.0% | 89.4% |
| 5cw7B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.88 | 83.0 | 7.73e-01 | 100.0% | 89.4% |
| 7bwfA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.87 | 81.0 | 7.84e-01 | 100.0% | 94.3% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.85 | 78.0 | 7.24e-01 | 100.0% | 81.1% |
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.85 | 79.0 | 7.59e-01 | 100.0% | 89.9% |
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.84 | 78.0 | 7.48e-01 | 100.0% | 91.1% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.82 | 77.0 | 7.38e-01 | 100.0% | 92.0% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.79 | 72.0 | 6.96e-01 | 98.7% | 89.5% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.78 | 72.0 | 6.87e-01 | 100.0% | 92.2% |
| 4mcxF00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.77 | 70.0 | 6.70e-01 | 100.0% | 98.9% |
| 1u4cB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 42.0 | 2.73e-01 | 100.0% | 15.5% |
| 3k0yA01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.58 | 30.0 | 3.27e-01 | 100.0% | 56.9% |
| 6n8pA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 40.0 | 2.60e-01 | 100.0% | 15.2% |
| 2r55A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 40.0 | 3.02e-01 | 75.9% | 80.8% |
| 2x6hA02 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.56 | 39.0 | 3.13e-01 | 70.9% | 94.3% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 41.0 | 2.74e-01 | 77.2% | 70.2% |
| 1dxkA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 40.0 | 2.99e-01 | 81.0% | 63.8% |
| 6iw6A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 38.0 | 3.50e-01 | 75.9% | 99.1% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.53 | 32.0 | 3.63e-01 | 98.7% | 83.9% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 42.0 | 2.67e-01 | 89.9% | 25.1% |
| 2r5vB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 44.0 | 3.44e-01 | 100.0% | 81.5% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 4.32e-01 | 98.7% | 88.6% |
| 1jssA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 38.0 | 2.93e-01 | 79.7% | 83.9% |
| 4gakA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 43.0 | 3.06e-01 | 94.9% | 74.8% |
| 6u1oA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.51 | 35.0 | 3.22e-01 | 73.4% | 99.1% |
| 1twuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 38.0 | 3.25e-01 | 83.5% | 89.1% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030204 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.98 | 86.0 | 8.87e-01 | 98.7% | 96.0% |
| 5031302 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.97 | 93.0 | 8.28e-01 | 100.0% | 94.3% |
| 5005256 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.96 | 91.0 | 8.89e-01 | 100.0% | 91.8% |
| 4968774 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.94 | 84.0 | 8.69e-01 | 98.7% | 98.7% |
| 5032565 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.94 | 90.0 | 8.77e-01 | 100.0% | 92.9% |
| 5029836 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.93 | 83.0 | 8.27e-01 | 100.0% | 91.3% |
| 4994192 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.93 | 85.0 | 8.53e-01 | 100.0% | 95.0% |
| 4969644 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.93 | 88.0 | 8.35e-01 | 100.0% | 94.4% |
| 5016951 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.93 | 87.0 | 8.06e-01 | 98.7% | 83.2% |
| 5062498 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.92 | 87.0 | 8.50e-01 | 100.0% | 92.9% |
| 5018720 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.92 | 86.0 | 8.40e-01 | 100.0% | 91.8% |
| 5063859 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.92 | 85.0 | 8.46e-01 | 100.0% | 95.0% |
| 5052823 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.92 | 88.0 | 8.15e-01 | 100.0% | 91.6% |
| 3604507 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.92 | 87.0 | 8.12e-01 | 100.0% | 84.0% |
| 4984297 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.92 | 86.0 | 8.19e-01 | 100.0% | 86.7% |
| 4999510 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.92 | 85.0 | 8.32e-01 | 100.0% | 90.6% |
| 5080427 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.91 | 81.0 | 8.08e-01 | 100.0% | 92.5% |
| 2549544 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.91 | 85.0 | 8.19e-01 | 100.0% | 96.6% |
| 5071213 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.91 | 83.0 | 8.30e-01 | 100.0% | 95.0% |
| 4887373 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.91 | 84.0 | 8.43e-01 | 100.0% | 97.5% |
| 4363733 | 4312.1.1.13 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Toxin_YhaV | 0.90 | 85.0 | 6.76e-01 | 100.0% | 73.8% |
| 5027871 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.90 | 85.0 | 7.97e-01 | 100.0% | 89.2% |
| 5029202 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.90 | 79.0 | 7.67e-01 | 100.0% | 85.9% |
| 4950220 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.90 | 85.0 | 8.08e-01 | 100.0% | 88.9% |
| 5007067 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 85.0 | 8.07e-01 | 100.0% | 93.3% |
| 3586933 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 82.0 | 7.66e-01 | 98.7% | 96.8% |
| 5065653 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.89 | 84.0 | 7.50e-01 | 100.0% | 93.3% |
| 4967722 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 80.0 | 8.00e-01 | 98.7% | 93.8% |
| 4967379 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.89 | 83.0 | 8.13e-01 | 100.0% | 92.9% |
| 5078519 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 84.0 | 7.81e-01 | 100.0% | 91.6% |
| 4937462 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 83.0 | 7.71e-01 | 100.0% | 89.5% |
| 4968316 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 82.0 | 7.90e-01 | 100.0% | 88.6% |
| 1877168 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 83.0 | 7.80e-01 | 100.0% | 91.3% |
| 3165472 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.88 | 82.0 | 7.63e-01 | 100.0% | 92.6% |
| 5014147 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 81.0 | 8.12e-01 | 100.0% | 96.2% |
| 4646165 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 83.0 | 7.89e-01 | 100.0% | 92.2% |
| 2629016 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.87 | 81.0 | 7.84e-01 | 100.0% | 94.3% |
| 2807914 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.87 | 81.0 | 7.77e-01 | 100.0% | 91.0% |
| 4948982 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.87 | 81.0 | 7.76e-01 | 100.0% | 90.0% |
| 4933908 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 81.0 | 7.91e-01 | 100.0% | 94.1% |
| 3166135 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.86 | 78.0 | 7.27e-01 | 100.0% | 80.0% |
| 4960121 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.86 | 80.0 | 7.21e-01 | 100.0% | 91.4% |
| 134040 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 78.0 | 7.24e-01 | 100.0% | 81.1% |
| 5031617 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 79.0 | 7.93e-01 | 98.7% | 97.5% |
| 138730 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 79.0 | 7.59e-01 | 100.0% | 89.9% |
| 2060430 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.85 | 76.0 | 7.63e-01 | 100.0% | 94.9% |
| 4966983 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.85 | 78.0 | 7.83e-01 | 100.0% | 97.5% |
| 4962176 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 77.0 | 7.73e-01 | 100.0% | 97.5% |
| 3602698 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 78.0 | 7.60e-01 | 100.0% | 92.9% |
| 2057235 | 4312.1.1.5 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › RelE | 0.83 | 76.0 | 6.74e-01 | 100.0% | 71.3% |
| 169853 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.80 | 71.0 | 6.97e-01 | 98.7% | 89.4% |
| 5007064 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.79 | 68.0 | 6.95e-01 | 100.0% | 97.3% |
| 166546 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.78 | 72.0 | 6.87e-01 | 100.0% | 92.2% |
| 1124757 | 4312.1.1.2 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB-like_toxin | 0.76 | 69.0 | 6.58e-01 | 100.0% | 96.8% |
| 4993641 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.74 | 60.0 | 6.20e-01 | 100.0% | 93.3% |
| 4993827 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.73 | 62.0 | 6.24e-01 | 100.0% | 90.0% |
| 3185751 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.67 | 43.0 | 2.69e-01 | 78.5% | 12.6% |
| 4203120 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.67 | 42.0 | 2.62e-01 | 77.2% | 11.5% |
| 5030390 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.67 | 54.0 | 5.20e-01 | 100.0% | 79.8% |
| 3388897 | 5.1.4.407 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, Alsin_RLD | 0.65 | 43.0 | 2.78e-01 | 100.0% | 14.2% |
| 3930546 | 5.1.4.90 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 | 0.62 | 43.0 | 2.75e-01 | 70.9% | 23.6% |
| 3592992 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 43.0 | 2.86e-01 | 100.0% | 17.8% |
| 4029773 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 44.0 | 2.81e-01 | 75.9% | 20.0% |
| 3601964 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.58 | 52.0 | 4.21e-01 | 100.0% | 97.3% |
| 3939735 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 42.0 | 2.68e-01 | 100.0% | 15.4% |
| 4026020 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 40.0 | 2.55e-01 | 100.0% | 14.8% |
| 3182913 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 39.0 | 2.37e-01 | 70.9% | 28.6% |
| 3471260 | 5.1.4.661 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st | 0.55 | 42.0 | 2.74e-01 | 81.0% | 96.8% |
| 3608650 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 36.0 | 2.33e-01 | 100.0% | 13.9% |
| 3675589 | 5.1.4.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 | 0.54 | 39.0 | 2.48e-01 | 74.7% | 28.2% |
| 3169468 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 38.0 | 2.37e-01 | 73.4% | 80.0% |
| 3794065 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 40.0 | 2.58e-01 | 100.0% | 16.8% |