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IMGVR_UViG_3300031280_000001-3300031280-Ga0307428_100016416

Arc-Vir

IMGVR_UViG_3300031280_000001-3300031280-Ga0307428_100016416

Quality

83.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 466-713
PDB
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5m1pB00 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.89 61.0 6.96e-01 96.4% 90.5%
4dkwA00 3.30.420.280 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.72 51.0 5.72e-01 81.5% 91.2%
4ifeA02 3.30.420.240 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.67 50.0 5.27e-01 76.6% 93.4%
3psfA04 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.67 40.0 4.81e-01 75.8% 88.4%
4ioyX02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 27.0 3.83e-01 97.6% 90.4%
3oc4B03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.57 29.0 4.09e-01 97.2% 100.0%
1dxlA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.57 28.0 3.98e-01 95.6% 96.7%
6cmzB03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.57 28.0 4.01e-01 96.0% 99.2%
3ic9A04 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 29.0 4.07e-01 97.6% 99.2%
1ojtA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 27.0 3.85e-01 95.2% 94.3%
1yqzA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 26.0 3.87e-01 79.4% 100.0%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.55 27.0 3.88e-01 79.8% 100.0%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.55 26.0 3.87e-01 79.4% 100.0%
1nhpA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.55 26.0 3.89e-01 80.6% 100.0%
2a8xA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.55 27.0 3.81e-01 95.6% 95.1%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.55 26.0 3.87e-01 83.1% 100.0%
4k7zA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.54 27.0 3.69e-01 95.6% 91.3%
1w97L01 3.30.420.380 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.54 32.0 4.05e-01 75.0% 94.2%
1xdiA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.54 26.0 3.72e-01 96.4% 94.3%
8ajkA02 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.53 25.0 3.68e-01 93.1% 100.0%
1dynA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 24.0 3.38e-01 96.0% 91.2%
3o6uC00 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.50 24.0 3.41e-01 75.4% 93.3%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083931 2484.1.1.77 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.87 57.0 6.83e-01 79.0% 94.3%
1949055 2484.1.1.77 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.86 59.0 6.80e-01 98.0% 90.5%
4988089 2484.1.1.77 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.82 57.0 6.56e-01 78.2% 92.6%
4974213 2484.1.1.77 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.75 56.0 6.32e-01 76.2% 99.0%
5041440 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 53.0 5.77e-01 78.6% 91.9%
3291482 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.69 31.0 4.71e-01 78.6% 99.0%
3587035 2484.1.1.86 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease 0.69 53.0 5.77e-01 80.2% 93.3%
3590721 2484.1.1.86 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease 0.68 52.0 5.68e-01 79.0% 92.4%
3597605 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 39.0 4.67e-01 76.2% 84.7%
4968414 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 37.0 4.21e-01 93.1% 83.8%
5041241 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.57 29.0 4.05e-01 96.8% 99.2%
4997883 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.56 27.0 3.95e-01 94.4% 98.3%
1176736 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.55 27.0 3.80e-01 95.6% 93.5%
5052500 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.55 27.0 3.91e-01 95.6% 100.0%
4028439 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.55 27.0 3.85e-01 95.6% 96.7%
5040074 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.55 26.0 3.82e-01 94.0% 98.3%
4982148 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.55 27.0 3.82e-01 94.4% 96.7%
3178490 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.55 28.0 3.95e-01 96.0% 98.4%
5076205 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.55 28.0 3.70e-01 97.2% 87.7%
4185543 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.54 27.0 3.66e-01 95.6% 89.1%
2981115 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.54 27.0 3.74e-01 96.8% 94.3%
2028652 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.54 28.0 3.89e-01 97.2% 97.6%
5010152 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.54 27.0 3.67e-01 95.6% 89.9%
4949321 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.54 26.0 3.72e-01 96.4% 96.5%
3587535 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.54 27.0 3.89e-01 95.2% 100.0%
4945919 244.2.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain 0.54 27.0 3.79e-01 95.6% 95.2%
3589959 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.54 27.0 3.86e-01 96.4% 100.0%
4953045 244.2.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain 0.54 26.0 3.74e-01 95.6% 96.6%
5050616 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.53 28.0 3.81e-01 96.8% 96.1%
3951658 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.53 27.0 3.59e-01 96.4% 87.4%
3270887 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.53 25.0 3.69e-01 94.0% 97.4%
6721 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.53 28.0 3.80e-01 96.8% 96.9%
5020999 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.53 23.0 3.54e-01 77.4% 100.0%
5035440 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.52 28.0 3.72e-01 98.4% 94.1%
4053151 244.2.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.52 25.0 3.58e-01 97.2% 95.8%
3981752 829.1.1.1 a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB 0.51 27.0 3.58e-01 96.0% 94.6%
D2 medium residues 1-54
PDB
D3 medium residues 55-220
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dmvA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 28.0 3.70e-01 94.0% 87.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4029286 616.1.1.1 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 0.58 33.0 3.66e-01 78.9% 68.5%
D4 medium residues 221-358
PDB
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2o0jA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.90 75.0 5.94e-01 100.0% 46.9%
1h9cA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 44.0 4.94e-01 91.3% 76.4%
3nbmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 43.0 4.88e-01 90.6% 78.8%
3eeqA01 3.40.50.11220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 42.0 4.44e-01 94.9% 73.3%
4kvfA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 44.0 4.16e-01 92.8% 59.4%
1y7pB02 3.40.50.10550 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein af1403; domain 2 0.64 44.0 4.43e-01 92.0% 70.1%
1dbqA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 41.0 4.23e-01 90.6% 67.2%
7bvaA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.63 51.0 4.29e-01 92.8% 51.8%
3u4qA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 57.0 4.76e-01 100.0% 73.2%
4kxwA03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 42.0 4.32e-01 96.4% 72.9%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 44.0 4.21e-01 97.8% 64.0%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 44.0 4.19e-01 96.4% 63.8%
4ry8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 43.0 4.26e-01 93.5% 69.6%
1tzbA01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 42.0 3.98e-01 94.2% 61.1%
6n2nC03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 39.0 4.29e-01 96.4% 82.0%
2xciA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 41.0 3.78e-01 97.8% 52.4%
2abwA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.60 43.0 3.73e-01 95.7% 48.1%
1tjyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 45.0 4.35e-01 95.7% 70.6%
2o1sB03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 39.0 4.07e-01 97.1% 71.7%
2ynmD01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.59 44.0 4.36e-01 95.7% 73.5%
2jgdA04 3.40.50.11610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain 0.59 43.0 4.10e-01 97.8% 65.4%
4pg4A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 44.0 4.22e-01 93.5% 67.5%
1uagA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.58 46.0 4.11e-01 94.2% 58.4%
1pzxB01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.58 38.0 3.99e-01 94.2% 73.0%
3fpfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 45.0 3.58e-01 97.8% 42.8%
1c2yA00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.57 44.0 4.32e-01 97.1% 73.5%
3wg9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 41.0 4.11e-01 95.7% 72.9%
7d27A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.57 48.0 4.10e-01 92.8% 69.6%
3cf4A02 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 42.0 3.72e-01 92.0% 54.1%
2c42A02 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 40.0 3.88e-01 97.1% 65.0%
2pjuC01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 28.0 3.19e-01 92.8% 61.0%
1gzhD02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.55 40.0 4.30e-01 94.9% 86.6%
3te6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 48.0 4.36e-01 96.4% 81.8%
1qzzA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 43.0 4.05e-01 97.1% 67.5%
2qy6A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 47.0 4.01e-01 94.9% 58.3%
4f2gA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.54 39.0 3.88e-01 96.4% 70.7%
5izlA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 46.0 4.23e-01 92.0% 75.3%
3g2mA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 43.0 4.10e-01 95.7% 70.9%
4hpnA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.53 42.0 3.42e-01 83.3% 78.8%
2eggB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.53 39.0 3.79e-01 92.8% 69.3%
5h7kA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 3.82e-01 94.2% 60.7%
3bioB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 42.0 3.93e-01 95.7% 66.7%
1kjwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 38.0 4.08e-01 92.8% 86.8%
1gcuA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 42.0 4.18e-01 92.0% 81.9%
3wydA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 44.0 3.99e-01 92.8% 80.3%
1h1lD03 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.52 40.0 4.06e-01 97.1% 82.7%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 42.0 4.02e-01 97.8% 74.4%
4a6dA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 46.0 3.75e-01 100.0% 52.6%
5d8nA01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.52 44.0 4.01e-01 93.5% 82.4%
3eixA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.51 39.0 3.59e-01 95.7% 61.0%
2x5jQ01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 43.0 4.01e-01 91.3% 79.1%
2oqhA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.51 40.0 3.32e-01 83.3% 67.9%
4qttB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 43.0 3.95e-01 100.0% 70.9%
2r7aA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.50 37.0 3.74e-01 94.9% 77.6%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
317607 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.90 75.0 5.33e-01 100.0% 33.1%
5031051 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 67.0 5.31e-01 100.0% 45.8%
3942031 2004.1.1.102 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.81 66.0 4.92e-01 100.0% 36.9%
3590724 2004.1.1.102 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.79 65.0 4.90e-01 100.0% 38.4%
4182861 2004.1.1.123 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.79 58.0 4.93e-01 100.0% 48.8%
4031261 2004.1.1.102 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.79 65.0 4.81e-01 100.0% 36.6%
4030936 2004.1.1.102 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.78 67.0 4.98e-01 100.0% 38.5%
3587034 2004.1.1.102 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.75 62.0 4.66e-01 100.0% 37.2%
1567474 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.74 68.0 5.42e-01 97.8% 78.7%
5080206 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 67.0 5.17e-01 100.0% 49.5%
3603125 2004.1.1.1077 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27249 0.71 66.0 5.00e-01 100.0% 47.4%
10970 2007.23.1.1 a/b three-layered sandwiches › Flavodoxin-like › CbiG N-terminal domain-like › CbiG N-terminal domain-like › CbiG_N 0.65 41.0 4.40e-01 94.9% 72.7%
3701350 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 59.0 5.31e-01 100.0% 86.3%
3897597 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 49.0 4.31e-01 80.4% 84.0%
3711821 2004.1.1.132 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DLIC 0.63 55.0 4.60e-01 94.9% 74.5%
5078510 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 56.0 4.67e-01 97.1% 67.0%
3611430 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 56.0 4.55e-01 97.8% 62.4%
4989980 2004.1.1.206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 0.61 53.0 4.10e-01 93.5% 68.5%
1230975 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.61 44.0 4.21e-01 97.8% 64.0%
3432433 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 53.0 4.39e-01 100.0% 54.6%
3264112 2004.1.1.234 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_D3-like 0.60 53.0 4.22e-01 95.7% 55.6%
3735838 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 52.0 3.77e-01 92.8% 41.1%
3481677 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 53.0 3.91e-01 97.1% 50.8%
3499431 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 54.0 4.65e-01 100.0% 77.7%
3711011 2004.1.1.133 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHD3_GTPase 0.59 51.0 3.88e-01 92.8% 52.1%
3662083 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 51.0 4.97e-01 94.9% 98.1%
4527523 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 52.0 4.25e-01 96.4% 100.0%
4999558 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.58 52.0 4.67e-01 95.7% 79.5%
3733909 316.1.1.24 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol_B_thumb,DNA_pol_B_palm 0.58 45.0 3.68e-01 81.9% 95.3%
4082717 7522.1.1.3 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › OxoGdeHyase_C 0.58 43.0 4.25e-01 98.6% 72.7%
4977110 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.57 50.0 4.54e-01 92.8% 77.8%
5006442 213.1.1.120 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › NAT10_TcmA_helicase 0.57 52.0 3.32e-01 100.0% 54.1%
4548855 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.57 42.0 2.80e-01 76.1% 44.0%
3178281 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 53.0 3.62e-01 100.0% 30.9%
3590891 7523.1.1.3 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 0.57 47.0 4.18e-01 88.4% 80.5%
4956472 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.56 50.0 4.37e-01 96.4% 79.4%
3392158 2003.1.1.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Malic_M 0.56 46.0 4.23e-01 100.0% 67.0%
3829245 2004.1.1.47 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › G-alpha 0.56 49.0 3.91e-01 94.9% 59.3%
3272468 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.55 41.0 3.92e-01 96.4% 66.3%
3276222 316.1.1.56 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › PF26128 0.55 45.0 3.84e-01 87.7% 95.2%
3706811 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 47.0 4.27e-01 92.8% 76.8%
4251003 2004.1.1.118 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 0.55 49.0 3.94e-01 96.4% 65.7%
3240979 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.55 42.0 3.95e-01 96.4% 66.7%
3701183 2004.1.1.164 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.55 47.0 3.93e-01 92.0% 63.0%
4660772 2004.1.1.50 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Guanylate_kin 0.55 47.0 4.05e-01 92.8% 81.4%
3449559 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 48.0 4.34e-01 95.7% 83.8%
None 0.54 47.0 3.54e-01 93.5% 49.1%
3609427 2004.1.1.414 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 0.54 47.0 3.40e-01 93.5% 39.1%
3997720 2007.25.1.1 a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domain in Ribosomal protein L1 › Rossmann-like domain in Ribosomal protein L1 › Ribosomal_L1 0.54 41.0 4.27e-01 95.7% 87.2%
4020460 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 47.0 3.66e-01 94.2% 56.6%
3717888 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.54 47.0 3.36e-01 93.5% 37.8%
3172340 2004.1.1.132 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DLIC 0.54 46.0 3.85e-01 94.9% 67.3%
4968501 316.1.1.18 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.54 44.0 3.70e-01 87.0% 92.2%
4425807 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.53 31.0 3.41e-01 87.0% 69.6%
3814956 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.53 39.0 2.80e-01 78.3% 53.9%
1406624 7579.1.1.3 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.52 44.0 3.99e-01 92.8% 80.3%
4348495 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.52 46.0 3.89e-01 97.8% 64.0%
None 0.52 48.0 3.96e-01 100.0% 66.4%
3233534 2004.1.1.164 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.51 44.0 3.83e-01 91.3% 71.2%
2050093 2007.1.14.5 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Peripla_BP_2 0.51 39.0 3.84e-01 95.7% 74.5%
259840 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.51 46.0 3.75e-01 100.0% 52.5%
3929204 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.50 45.0 4.10e-01 95.7% 73.3%
3708374 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.50 44.0 3.81e-01 97.1% 68.0%
4261317 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.50 42.0 3.86e-01 94.9% 70.9%
D5 medium residues 720-764
PDB