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IMGVR_UViG_3300031280_000001-3300031280-Ga0307428_100016466
Arc-VirIMGVR_UViG_3300031280_000001-3300031280-Ga0307428_100016466
Identity
- Kingdom:
- archaea
Quality
66.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-99
D2
high
residues 108-177
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.71 | 31.0 | 3.98e-01 | 92.9% | 69.2% |
| 1c7uA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.63 | 38.0 | 4.01e-01 | 71.4% | 66.7% |
| 3nuhB02 | 3.30.300.370 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.60 | 42.0 | 3.59e-01 | 75.7% | 93.4% |
| 4geqB00 | 3.30.160.430 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 32.0 | 3.48e-01 | 97.1% | 60.3% |
| 2pgxA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 38.0 | 2.88e-01 | 70.0% | 35.1% |
| 1xtfA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.57 | 48.0 | 2.99e-01 | 95.7% | 53.4% |
| 2wnhA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.56 | 43.0 | 2.79e-01 | 88.6% | 92.0% |
| 3psqB00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.56 | 48.0 | 3.65e-01 | 100.0% | 90.7% |
| 3v98B01 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.56 | 49.0 | 4.18e-01 | 100.0% | 93.2% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.54 | 39.0 | 2.88e-01 | 75.7% | 35.8% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3715519 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.73 | 52.0 | 3.68e-01 | 81.4% | 25.4% |
| 3679276 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.72 | 43.0 | 4.55e-01 | 71.4% | 66.7% |
| 3277842 | 4187.1.1.1 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB | 0.67 | 50.0 | 5.30e-01 | 100.0% | 93.3% |
| 3318217 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.62 | 44.0 | 4.20e-01 | 77.1% | 65.0% |
| 3282757 | 2002.1.1.143 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Met_asp_mut_E | 0.62 | 49.0 | 3.05e-01 | 87.1% | 68.3% |
| 3818050 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.61 | 44.0 | 4.19e-01 | 75.7% | 65.0% |
| 4828613 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.61 | 43.0 | 4.10e-01 | 75.7% | 63.0% |
| 3781870 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.61 | 43.0 | 4.01e-01 | 75.7% | 60.0% |
| 3339917 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.59 | 49.0 | 4.78e-01 | 95.7% | 85.0% |
| 4932636 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.58 | 43.0 | 3.09e-01 | 81.4% | 33.5% |
| 3839775 | 1110.1.1.0 ↗ | beta sandwiches › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellar hook subunit protein FlgE beta sandwich domain › Flagellar hook subunit protein FlgE beta sandwich domain | 0.57 | 50.0 | 4.03e-01 | 100.0% | 98.6% |
| 3600582 | 2003.1.7.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like | 0.57 | 41.0 | 2.78e-01 | 77.1% | 39.6% |
| 4033043 | 616.1.1.41 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Terminase_4 | 0.57 | 39.0 | 3.64e-01 | 72.9% | 87.8% |
| 4019876 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 40.0 | 3.60e-01 | 77.1% | 53.0% |
| 3217385 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 36.0 | 3.48e-01 | 78.6% | 56.5% |
| 3509988 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.54 | 38.0 | 3.33e-01 | 75.7% | 97.3% |
| 4567315 | 3422.1.1.0 ↗ | a+b two layers › TEN domain of telomerase reverse transcriptase › TEN domain of telomerase reverse transcriptase › TEN domain of telomerase reverse transcriptase | 0.53 | 40.0 | 3.00e-01 | 81.4% | 88.6% |
| 4339025 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 44.0 | 3.23e-01 | 100.0% | 53.2% |
| 5042330 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.51 | 32.0 | 3.23e-01 | 75.7% | 62.9% |
| 4226755 | 2004.1.1.782 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23, AAA_29, SbcC_Walker_B | 0.50 | 43.0 | 2.67e-01 | 100.0% | 23.4% |
| 4113044 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.50 | 44.0 | 3.05e-01 | 100.0% | 81.2% |
| 3506055 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.50 | 40.0 | 3.04e-01 | 85.7% | 81.2% |