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IMGVR_UViG_3300031280_000001-3300031280-Ga0307428_100016473
Arc-VirIMGVR_UViG_3300031280_000001-3300031280-Ga0307428_100016473
Identity
- Kingdom:
- archaea
Quality
77.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-189
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p8dB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 39.0 | 3.45e-01 | 70.6% | 59.0% |
| 2j1dG01 | 1.20.58.2220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain | 0.53 | 38.0 | 2.88e-01 | 71.8% | 63.5% |
| 1k74D00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.52 | 37.0 | 3.15e-01 | 71.8% | 64.3% |
| 3rkgA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.50 | 35.0 | 3.65e-01 | 71.2% | 93.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3547352 | 626.1.1.1 ↗ | alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 | 0.52 | 42.0 | 3.07e-01 | 84.1% | 49.2% |
| 3793995 | 109.4.1.2556 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19, PF30363, PF30475 | 0.51 | 40.0 | 2.79e-01 | 81.8% | 60.3% |