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IMGVR_UViG_3300031368_000084-3300031368-Ga0307429_10059546
Arc-VirIMGVR_UViG_3300031368_000084-3300031368-Ga0307429_10059546
Identity
- Kingdom:
- archaea
Quality
76.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-120
Domain cluster:
rep: OL597546.1__UUB23297.1__X__00001__D24-147
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1at3A00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.75 | 68.0 | 5.33e-01 | 96.4% | 55.8% |
| 1o6eA00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.74 | 66.0 | 5.18e-01 | 96.4% | 61.8% |
| 3u28C00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.71 | 45.0 | 4.89e-01 | 95.5% | 77.2% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.71 | 42.0 | 4.95e-01 | 97.3% | 86.7% |
| 1cmvB00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.67 | 62.0 | 4.94e-01 | 98.2% | 57.3% |
| 2nwaA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.67 | 36.0 | 4.22e-01 | 73.9% | 76.0% |
| 2eqnA01 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.63 | 40.0 | 4.38e-01 | 96.4% | 79.3% |
| 4l68A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 33.0 | 3.40e-01 | 70.3% | 51.8% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 34.0 | 4.19e-01 | 82.0% | 85.7% |
| 1vioA03 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.61 | 37.0 | 4.22e-01 | 89.2% | 82.9% |
| 2ra1A04 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 42.0 | 4.51e-01 | 92.8% | 85.6% |
| 1fjeB01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 38.0 | 4.24e-01 | 95.5% | 90.1% |
| 2sfaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 36.0 | 3.92e-01 | 79.3% | 76.9% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.56 | 41.0 | 4.00e-01 | 81.1% | 68.9% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.56 | 37.0 | 3.65e-01 | 77.5% | 60.0% |
| 2cxiA01 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.56 | 35.0 | 4.07e-01 | 93.7% | 87.3% |
| 2z7rA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 30.0 | 3.41e-01 | 74.8% | 67.9% |
| 2ia0B02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.55 | 38.0 | 4.05e-01 | 98.2% | 79.8% |
| 1nrkA01 | 3.30.70.1630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 35.0 | 3.77e-01 | 84.7% | 73.2% |
| 3to8A02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 34.0 | 3.63e-01 | 87.4% | 70.8% |
| 1yx2A02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.54 | 37.0 | 4.13e-01 | 83.8% | 91.9% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.54 | 31.0 | 3.53e-01 | 82.0% | 77.9% |
| 1yxsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 33.0 | 3.65e-01 | 73.0% | 75.0% |
| 1xocA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.54 | 42.0 | 4.16e-01 | 96.4% | 78.3% |
| 1itpA00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.53 | 32.0 | 3.66e-01 | 82.9% | 84.4% |
| 1kskA02 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 40.0 | 3.50e-01 | 95.5% | 52.7% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.52 | 37.0 | 3.53e-01 | 72.1% | 93.8% |
| 4wovA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 29.0 | 3.20e-01 | 70.3% | 67.9% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 39.0 | 3.97e-01 | 82.9% | 99.1% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003309 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.83 | 74.0 | 7.00e-01 | 93.7% | 91.5% |
| 4995675 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.83 | 77.0 | 6.65e-01 | 100.0% | 89.1% |
| 3166306 | 50.1.1.4 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › DUF2213 | 0.82 | 76.0 | 6.74e-01 | 98.2% | 91.5% |
| 5083161 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.82 | 77.0 | 6.94e-01 | 100.0% | 90.3% |
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.82 | 72.0 | 6.63e-01 | 93.7% | 91.4% |
| 5004197 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.81 | 65.0 | 6.86e-01 | 83.8% | 100.0% |
| 4960055 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.81 | 70.0 | 6.44e-01 | 91.0% | 89.1% |
| 3964748 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.80 | 67.0 | 6.90e-01 | 96.4% | 94.3% |
| 3602442 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.79 | 71.0 | 7.13e-01 | 94.6% | 98.2% |
| 1933303 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.79 | 73.0 | 6.30e-01 | 100.0% | 88.0% |
| 3955063 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.78 | 53.0 | 4.78e-01 | 97.3% | 52.4% |
| 3283246 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.78 | 55.0 | 4.98e-01 | 97.3% | 55.2% |
| 3958771 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.77 | 53.0 | 5.14e-01 | 98.2% | 64.2% |
| 3959024 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.77 | 49.0 | 5.11e-01 | 93.7% | 68.6% |
| 3957158 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.77 | 50.0 | 5.15e-01 | 94.6% | 69.5% |
| 3954964 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.77 | 70.0 | 6.37e-01 | 98.2% | 89.0% |
| 3286366 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.77 | 51.0 | 4.80e-01 | 97.3% | 56.3% |
| 3290923 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.76 | 52.0 | 4.84e-01 | 98.2% | 57.0% |
| 5083920 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.76 | 67.0 | 6.13e-01 | 92.8% | 95.0% |
| 3959338 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.76 | 51.0 | 4.66e-01 | 97.3% | 52.4% |
| 3347366 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.76 | 50.0 | 4.95e-01 | 94.6% | 64.3% |
| 3957231 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.75 | 50.0 | 5.08e-01 | 96.4% | 68.2% |
| 3288888 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.75 | 51.0 | 4.79e-01 | 98.2% | 57.0% |
| 3960414 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.75 | 51.0 | 4.65e-01 | 98.2% | 53.1% |
| 3964948 | 1.1.16.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › Peptidase_S78 | 0.75 | 69.0 | 6.61e-01 | 98.2% | 91.2% |
| 3957925 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.75 | 53.0 | 4.85e-01 | 97.3% | 57.1% |
| 3289705 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.75 | 52.0 | 4.75e-01 | 99.1% | 55.7% |
| 3956627 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.75 | 50.0 | 4.65e-01 | 98.2% | 54.3% |
| 788 | 50.1.1.1 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S21 | 0.75 | 68.0 | 5.33e-01 | 96.4% | 55.8% |
| 4654097 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.73 | 50.0 | 4.43e-01 | 97.3% | 49.7% |
| 5010595 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 45.0 | 5.04e-01 | 97.3% | 80.0% |
| 1304358 | 50.1.1.1 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S21 | 0.73 | 67.0 | 5.22e-01 | 98.2% | 58.6% |
| 3963908 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.72 | 42.0 | 5.15e-01 | 96.4% | 91.4% |
| 5074238 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 43.0 | 5.03e-01 | 98.2% | 86.7% |
| 4969578 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 42.0 | 4.99e-01 | 98.2% | 86.5% |
| 5002426 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.70 | 45.0 | 5.06e-01 | 97.3% | 84.7% |
| 3741028 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.70 | 52.0 | 5.33e-01 | 97.3% | 81.9% |
| 4001416 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.70 | 44.0 | 4.93e-01 | 96.4% | 82.4% |
| 4926946 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.69 | 43.0 | 4.79e-01 | 97.3% | 80.0% |
| 2771876 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.69 | 47.0 | 4.71e-01 | 92.8% | 68.1% |
| 5017568 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.69 | 43.0 | 4.97e-01 | 97.3% | 87.5% |
| 5038467 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 42.0 | 4.86e-01 | 98.2% | 86.1% |
| 1150480 | 50.1.1.1 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S21 | 0.67 | 54.0 | 5.57e-01 | 84.7% | 100.0% |
| 3483841 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.66 | 45.0 | 4.66e-01 | 97.3% | 74.8% |
| 5022659 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.64 | 42.0 | 4.87e-01 | 94.6% | 97.3% |
| 3714390 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.63 | 44.0 | 4.27e-01 | 95.5% | 64.0% |
| 5023503 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.63 | 34.0 | 4.08e-01 | 91.0% | 81.4% |
| 3596757 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 44.0 | 4.53e-01 | 95.5% | 77.1% |
| 4972520 | 304.24.1.6 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C | 0.62 | 34.0 | 4.08e-01 | 80.2% | 80.8% |
| 3845835 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.62 | 43.0 | 4.34e-01 | 95.5% | 71.8% |
| 3982061 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.62 | 51.0 | 4.87e-01 | 97.3% | 76.8% |
| 3943528 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.61 | 50.0 | 4.87e-01 | 97.3% | 79.2% |
| 5000784 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.61 | 44.0 | 4.67e-01 | 97.3% | 86.0% |
| 63949 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 39.0 | 4.18e-01 | 97.3% | 80.0% |
| 3777373 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.54 | 47.0 | 4.62e-01 | 96.4% | 93.3% |
| 4942434 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.54 | 39.0 | 4.18e-01 | 98.2% | 89.5% |
| 4026390 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 46.0 | 4.34e-01 | 96.4% | 77.0% |
| 3388880 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.51 | 43.0 | 4.33e-01 | 93.7% | 93.6% |
| None | — | 0.51 | 41.0 | 3.36e-01 | 87.4% | 61.0% | |
| 4273051 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.51 | 34.0 | 3.62e-01 | 86.5% | 77.0% |
D2
high
residues 329-414
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 49.0 | 4.66e-01 | 72.1% | 90.2% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.70 | 60.0 | 4.98e-01 | 96.5% | 99.4% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.70 | 49.0 | 3.82e-01 | 73.3% | 42.6% |
| 3f0cA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.65 | 45.0 | 3.85e-01 | 72.1% | 62.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4094756 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.80 | 55.0 | 3.84e-01 | 72.1% | 24.4% |
| 4008053 | 4168.1.1.7 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › PF26769 | 0.79 | 60.0 | 4.82e-01 | 81.4% | 80.0% |
| 5073411 | 5073.1.1.11 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C | 0.78 | 55.0 | 3.60e-01 | 73.3% | 61.2% |
| 5024245 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.76 | 54.0 | 4.92e-01 | 73.3% | 60.9% |
| 5039692 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.75 | 59.0 | 5.73e-01 | 82.6% | 98.9% |
| 4108697 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.75 | 55.0 | 3.87e-01 | 76.7% | 26.2% |
| 4405271 | 4207.1.1.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) | 0.74 | 58.0 | 4.74e-01 | 83.7% | 60.0% |
| None | — | 0.73 | 58.0 | 4.15e-01 | 84.9% | 29.6% | |
| 4025638 | 1189.1.1.0 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor | 0.73 | 57.0 | 4.29e-01 | 82.6% | 79.0% |
| 3389399 | 142.1.1.22 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SCAF11-like_C | 0.73 | 53.0 | 5.01e-01 | 77.9% | 72.4% |
| 4031352 | 6026.1.1.43 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › DUF1024 | 0.72 | 46.0 | 4.72e-01 | 70.9% | 66.7% |
| 4358519 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.71 | 54.0 | 5.12e-01 | 80.2% | 68.0% |
| 3821523 | 5069.1.3.122 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › PLAC8 | 0.71 | 51.0 | 4.64e-01 | 76.7% | 56.5% |
| 4637522 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.71 | 56.0 | 5.10e-01 | 84.9% | 64.3% |
| 3656716 | 3755.3.1.498 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › PF31016 | 0.71 | 58.0 | 4.75e-01 | 86.0% | 53.1% |
| 4234794 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.69 | 60.0 | 4.26e-01 | 96.5% | 94.9% |
| 3604704 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.66 | 50.0 | 4.26e-01 | 80.2% | 78.6% |
| 4549030 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.66 | 45.0 | 4.93e-01 | 70.9% | 87.1% |
| 4031085 | 3826.1.1.79 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF1024 | 0.64 | 42.0 | 4.42e-01 | 70.9% | 74.4% |
D3
medium
residues 177-200_224-327
Domain cluster:
rep: KC292026__AGM11341.1__HGTV1-11__00011__D565-672
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z16B01 | 1.20.91.10 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Influenza matrix M1, N-terminal subdomain 1 | 0.63 | 37.0 | 4.55e-01 | 70.3% | 93.6% |
| 1rq5A02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.53 | 46.0 | 3.17e-01 | 100.0% | 70.8% |
| 3x17A02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 44.0 | 3.16e-01 | 100.0% | 72.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3313027 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 41.0 | 3.28e-01 | 76.6% | 69.8% |
| 4623297 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.54 | 38.0 | 3.78e-01 | 72.7% | 100.0% |
| 3431349 | 109.4.1.3446 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_8, TPR_10, TPR_12, SNAP | 0.51 | 42.0 | 2.78e-01 | 91.4% | 21.3% |
| 3844702 | 109.4.1.630 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_TTP_bind,CNOT1_HEAT | 0.51 | 40.0 | 2.95e-01 | 83.6% | 50.7% |
| 3875420 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.50 | 40.0 | 2.49e-01 | 82.8% | 16.0% |