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IMGVR_UViG_3300031379_000156-3300031379-Ga0307434_10044291
Arc-VirIMGVR_UViG_3300031379_000156-3300031379-Ga0307434_10044291
Identity
- Kingdom:
- archaea
Quality
81.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-83
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08544.19 best | GHMP_kinases_C | 39.7 | 7.20e-10 | 96.4% | 88.2% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4uskA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.93 | 89.0 | 6.99e-01 | 100.0% | 53.9% |
| 4hacA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.89 | 81.0 | 6.86e-01 | 100.0% | 62.8% |
| 2x7iA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.88 | 83.0 | 6.97e-01 | 100.0% | 64.1% |
| 2oi2A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.88 | 82.0 | 6.80e-01 | 100.0% | 61.2% |
| 2hfsA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.88 | 81.0 | 6.55e-01 | 100.0% | 56.2% |
| 6tepC02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.85 | 77.0 | 5.87e-01 | 100.0% | 45.3% |
| 6q3wB02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.84 | 78.0 | 6.09e-01 | 100.0% | 50.0% |
| 3gonA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.84 | 77.0 | 6.50e-01 | 100.0% | 61.9% |
| 1kkhA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.83 | 72.0 | 6.09e-01 | 100.0% | 58.8% |
| 4rpfA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.82 | 73.0 | 6.11e-01 | 100.0% | 59.4% |
| 1mg7A01 | 3.30.70.1000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Switch protein XOL-1, GHMP-like | 0.73 | 66.0 | 5.15e-01 | 100.0% | 52.6% |
| 2kyzA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 43.0 | 4.73e-01 | 85.5% | 83.6% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 46.0 | 4.71e-01 | 88.0% | 75.6% |
| 6l3tA01 | 1.20.1440.80 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain | 0.61 | 43.0 | 3.31e-01 | 74.7% | 87.9% |
| 2a2cA02 | 3.30.70.3170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 50.0 | 5.00e-01 | 91.6% | 86.9% |
| 2dgrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 40.0 | 4.40e-01 | 85.5% | 95.5% |
| 3c1mA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.55 | 49.0 | 3.96e-01 | 100.0% | 65.9% |
| 3u1kB04 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.55 | 42.0 | 4.51e-01 | 88.0% | 93.1% |
| 3mtkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 48.0 | 3.88e-01 | 100.0% | 54.6% |
| 4g08A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.54 | 38.0 | 4.14e-01 | 88.0% | 88.6% |
| 3gr5A02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.54 | 37.0 | 4.07e-01 | 85.5% | 88.2% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 42.0 | 3.98e-01 | 89.2% | 70.7% |
| 2op5B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 42.0 | 3.95e-01 | 85.5% | 76.0% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 46.0 | 3.25e-01 | 100.0% | 50.4% |
| 1eteA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 42.0 | 3.66e-01 | 89.2% | 64.9% |
| 4dokA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.51 | 41.0 | 3.50e-01 | 95.2% | 73.5% |
| 7e6gA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 45.0 | 3.74e-01 | 100.0% | 62.4% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.51 | 38.0 | 3.54e-01 | 85.5% | 63.2% |
| 3c9gA01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.50 | 38.0 | 3.43e-01 | 84.3% | 65.1% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024639 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.95 | 91.0 | 7.31e-01 | 100.0% | 57.2% |
| 5056938 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.94 | 91.0 | 7.08e-01 | 100.0% | 53.5% |
| 3953545 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.94 | 90.0 | 6.91e-01 | 100.0% | 50.3% |
| 4941907 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.93 | 88.0 | 7.08e-01 | 100.0% | 57.2% |
| 5053789 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.92 | 88.0 | 6.98e-01 | 100.0% | 55.3% |
| 5025970 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.92 | 86.0 | 7.21e-01 | 100.0% | 63.1% |
| 3718001 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.91 | 86.0 | 6.70e-01 | 100.0% | 52.5% |
| 4373548 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.90 | 82.0 | 6.71e-01 | 100.0% | 57.1% |
| 4050878 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.90 | 82.0 | 6.76e-01 | 100.0% | 57.9% |
| 4951235 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.89 | 80.0 | 6.57e-01 | 100.0% | 56.4% |
| 4946980 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.89 | 82.0 | 6.71e-01 | 100.0% | 57.9% |
| 4983386 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.89 | 82.0 | 6.66e-01 | 100.0% | 56.6% |
| 154408 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.89 | 81.0 | 6.46e-01 | 100.0% | 52.9% |
| 4933627 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.89 | 81.0 | 6.43e-01 | 100.0% | 52.3% |
| 5026667 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.88 | 81.0 | 6.49e-01 | 100.0% | 54.4% |
| 5054879 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.88 | 80.0 | 6.52e-01 | 100.0% | 55.9% |
| 5030236 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.88 | 82.0 | 6.51e-01 | 100.0% | 56.9% |
| 5046868 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.87 | 81.0 | 6.21e-01 | 100.0% | 47.4% |
| 4592284 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.87 | 80.0 | 6.01e-01 | 100.0% | 44.3% |
| 3962408 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.87 | 80.0 | 5.94e-01 | 100.0% | 43.2% |
| 3869430 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.86 | 81.0 | 5.62e-01 | 100.0% | 35.4% |
| 3248812 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.86 | 80.0 | 5.45e-01 | 100.0% | 38.8% |
| 4978570 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.85 | 79.0 | 6.31e-01 | 100.0% | 56.8% |
| 3931940 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.85 | 79.0 | 5.59e-01 | 100.0% | 36.4% |
| 4576635 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.85 | 78.0 | 5.98e-01 | 100.0% | 46.9% |
| 3487716 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.85 | 79.0 | 5.42e-01 | 100.0% | 37.3% |
| 3369620 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.85 | 79.0 | 5.39e-01 | 100.0% | 38.1% |
| 5078137 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.85 | 79.0 | 6.10e-01 | 100.0% | 48.8% |
| 5044855 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.85 | 78.0 | 5.95e-01 | 100.0% | 46.1% |
| 5009299 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.84 | 73.0 | 6.10e-01 | 100.0% | 57.0% |
| 4487660 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.84 | 78.0 | 5.83e-01 | 100.0% | 43.7% |
| 4153661 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.84 | 77.0 | 5.83e-01 | 100.0% | 43.9% |
| 3810941 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.84 | 78.0 | 5.75e-01 | 100.0% | 51.3% |
| 4013330 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.84 | 78.0 | 5.27e-01 | 100.0% | 34.2% |
| 5079544 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.82 | 74.0 | 5.77e-01 | 100.0% | 47.4% |
| 4955889 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.80 | 68.0 | 5.83e-01 | 100.0% | 58.5% |
| 1202529 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.77 | 71.0 | 5.96e-01 | 100.0% | 64.4% |
| 4118156 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.74 | 61.0 | 5.12e-01 | 100.0% | 52.4% |
| 5025510 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 48.0 | 3.99e-01 | 73.5% | 76.4% |
| 3993677 | 823.1.1.0 ↗ | a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW | 0.64 | 31.0 | 3.40e-01 | 83.1% | 54.3% |
| 3266841 | 304.8.1.22 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT | 0.62 | 46.0 | 4.65e-01 | 95.2% | 76.5% |
| 167371 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.62 | 47.0 | 5.01e-01 | 92.8% | 93.1% |
| 5044181 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.62 | 44.0 | 4.63e-01 | 81.9% | 82.7% |
| 4379250 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.61 | 45.0 | 4.72e-01 | 96.4% | 85.3% |
| 4990535 | 305.2.1.2 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › DUF2067 | 0.60 | 41.0 | 4.56e-01 | 85.5% | 90.8% |
| 3218110 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.59 | 43.0 | 4.51e-01 | 88.0% | 84.0% |
| 3407270 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.56 | 42.0 | 4.42e-01 | 88.0% | 88.0% |
| 4025349 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.55 | 39.0 | 3.40e-01 | 74.7% | 83.8% |
| 4682115 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.55 | 41.0 | 4.02e-01 | 91.6% | 74.4% |
| 4961640 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.53 | 46.0 | 3.39e-01 | 100.0% | 36.7% |
| 5019573 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.52 | 46.0 | 3.36e-01 | 98.8% | 39.1% |
| 4965147 | 5001.1.1.292 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM | 0.51 | 45.0 | 3.31e-01 | 100.0% | 38.7% |
| 3942347 | 304.48.1.14 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF | 0.51 | 45.0 | 3.67e-01 | 100.0% | 53.1% |
| 5050894 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.50 | 37.0 | 2.70e-01 | 78.3% | 68.8% |