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IMGVR_UViG_3300031566_012282-3300031566-Ga0307378_100236849
Arc-VirIMGVR_UViG_3300031566_012282-3300031566-Ga0307378_100236849
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-65
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5nx5B00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.68 | 55.0 | 3.50e-01 | 89.7% | 19.2% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.66 | 57.0 | 4.41e-01 | 96.6% | 85.3% |
| 2d1hB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 4.15e-01 | 81.0% | 98.0% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.64 | 41.0 | 3.58e-01 | 82.8% | 42.7% |
| 2kilA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.62 | 41.0 | 2.91e-01 | 86.2% | 22.1% |
| 1aipH03 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.61 | 43.0 | 4.46e-01 | 86.2% | 82.7% |
| 4bfmA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.61 | 45.0 | 2.77e-01 | 77.6% | 16.0% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 53.0 | 4.53e-01 | 96.6% | 80.7% |
| 2ltuA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.58 | 41.0 | 4.08e-01 | 77.6% | 88.7% |
| 1qusA01 | 1.10.8.350 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase | 0.57 | 43.0 | 3.42e-01 | 79.3% | 70.8% |
| 3vfcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 38.0 | 2.92e-01 | 72.4% | 74.5% |
| 2l22A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.53 | 39.0 | 3.45e-01 | 96.6% | 52.7% |
| 1nv8B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.50 | 37.0 | 3.51e-01 | 79.3% | 88.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3212195 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.90 | 83.0 | 6.60e-01 | 100.0% | 53.6% |
| 4210840 | 4082.1.1.0 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain | 0.73 | 64.0 | 5.21e-01 | 100.0% | 54.5% |
| 2141321 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.72 | 62.0 | 4.55e-01 | 96.6% | 55.2% |
| 4315800 | 2004.1.1.72 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IPT | 0.68 | 56.0 | 3.70e-01 | 91.4% | 36.2% |
| 5073392 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.67 | 53.0 | 4.48e-01 | 86.2% | 61.1% |
| 3884801 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.64 | 51.0 | 3.54e-01 | 87.9% | 88.7% |
| 3754251 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.63 | 44.0 | 3.06e-01 | 74.1% | 89.2% |
| 3889743 | 105.1.1.1 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › HLH | 0.62 | 53.0 | 4.58e-01 | 100.0% | 89.5% |
| 3494824 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.60 | 42.0 | 3.02e-01 | 75.9% | 47.7% |
| 4140444 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.59 | 46.0 | 3.82e-01 | 87.9% | 79.1% |
| 3696725 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.56 | 39.0 | 2.86e-01 | 74.1% | 26.1% |
| None | — | 0.56 | 49.0 | 3.02e-01 | 100.0% | 17.9% | |
| None | — | 0.54 | 42.0 | 3.65e-01 | 94.8% | 81.9% | |
| 3793872 | 2004.1.1.112 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-mevalo_kinase | 0.52 | 43.0 | 2.97e-01 | 89.7% | 94.0% |