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IMGVR_UViG_3300031605_001749-3300031605-Ga0302132_100126475
Arc-VirIMGVR_UViG_3300031605_001749-3300031605-Ga0302132_100126475
Identity
- Kingdom:
- archaea
Quality
90.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-29
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00313.29 best | CSD | 43.7 | 2.80e-11 | 96.5% | 42.4% |
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2haxA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.95 | 84.0 | 7.30e-01 | 100.0% | 67.4% |
| 3aqqA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.91 | 78.0 | 5.31e-01 | 100.0% | 30.3% |
| 2kcmA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 58.0 | 4.59e-01 | 96.6% | 37.8% |
| 1r9cA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.78 | 62.0 | 4.13e-01 | 100.0% | 26.4% |
| 2rk9B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.76 | 57.0 | 3.95e-01 | 100.0% | 23.9% |
| 5x68A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 57.0 | 3.25e-01 | 100.0% | 8.2% |
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 51.0 | 4.77e-01 | 100.0% | 58.7% |
| 3h8lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 50.0 | 3.18e-01 | 100.0% | 19.0% |
| 3ayjA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 53.0 | 3.03e-01 | 100.0% | 9.0% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 50.0 | 4.51e-01 | 100.0% | 52.8% |
| 1vwxA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 51.0 | 4.06e-01 | 100.0% | 56.2% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 52.0 | 4.32e-01 | 100.0% | 43.3% |
| 4z3xA03 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.68 | 50.0 | 3.15e-01 | 93.1% | 18.3% |
| 1reoA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 51.0 | 3.39e-01 | 100.0% | 20.9% |
| 2d9tA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 53.0 | 4.75e-01 | 100.0% | 61.2% |
| 2bh8B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 48.0 | 4.35e-01 | 100.0% | 54.5% |
| 1zuuA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 45.0 | 4.14e-01 | 100.0% | 53.6% |
| 4k7zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 48.0 | 2.94e-01 | 100.0% | 12.1% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 49.0 | 4.09e-01 | 100.0% | 53.0% |
| 3afcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 47.0 | 2.66e-01 | 100.0% | 12.5% |
| 3d1cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 50.0 | 3.49e-01 | 100.0% | 49.1% |
| 1faoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 49.0 | 3.56e-01 | 100.0% | 49.0% |
| 3kewB02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.64 | 48.0 | 3.25e-01 | 100.0% | 81.9% |
| 1pfjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 44.0 | 3.35e-01 | 100.0% | 45.4% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 44.0 | 3.87e-01 | 100.0% | 50.0% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 45.0 | 3.90e-01 | 100.0% | 49.2% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 48.0 | 4.10e-01 | 100.0% | 48.3% |
| 1hyuA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 48.0 | 3.10e-01 | 100.0% | 41.2% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 44.0 | 3.86e-01 | 100.0% | 46.0% |
| 1aorA02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.59 | 41.0 | 2.69e-01 | 89.7% | 17.2% |
| 6rjiA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 42.0 | 3.77e-01 | 100.0% | 53.8% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 40.0 | 2.89e-01 | 100.0% | 43.5% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 37.0 | 3.14e-01 | 100.0% | 45.6% |
| 5j60B02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 35.0 | 2.64e-01 | 100.0% | 45.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3700209 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.82 | 69.0 | 5.01e-01 | 100.0% | 34.1% |
| 5004478 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.82 | 67.0 | 4.91e-01 | 100.0% | 34.1% |
| 3613173 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 64.0 | 4.48e-01 | 100.0% | 27.6% |
| 3511278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 64.0 | 5.01e-01 | 100.0% | 41.4% |
| 4066093 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.80 | 63.0 | 3.63e-01 | 100.0% | 9.0% |
| 3703907 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 59.0 | 4.77e-01 | 100.0% | 44.6% |
| 2048175 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.74 | 55.0 | 3.92e-01 | 100.0% | 25.4% |
| 3421158 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 57.0 | 4.78e-01 | 100.0% | 48.3% |
| 1442407 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.73 | 55.0 | 3.46e-01 | 100.0% | 24.3% |
| 4945513 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.73 | 56.0 | 3.47e-01 | 100.0% | 97.1% |
| 1269916 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.71 | 50.0 | 3.63e-01 | 100.0% | 34.5% |
| 1412633 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 54.0 | 4.58e-01 | 100.0% | 50.0% |
| 1566284 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.70 | 53.0 | 2.93e-01 | 100.0% | 7.2% |
| 2664854 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.69 | 50.0 | 3.75e-01 | 100.0% | 44.1% |
| 3533300 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 47.0 | 4.76e-01 | 93.1% | 100.0% |
| 3573810 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 46.0 | 3.23e-01 | 100.0% | 22.8% |
| 3290750 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.63 | 50.0 | 3.32e-01 | 100.0% | 52.1% |
| 4516528 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.58 | 40.0 | 2.96e-01 | 100.0% | 22.6% |
| 3361883 | 1205.2.1.1 ↗ | a+b two layers › C-terminal domain of CdiA toxin › C-terminal domain of P. aeruginosa CdiA › C-terminal domain of P. aeruginosa CdiA › PF31217 | 0.53 | 37.0 | 2.82e-01 | 86.2% | 26.3% |