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IMGVR_UViG_3300031650_000024-3300031650-Ga0315539_100378215
Arc-VirIMGVR_UViG_3300031650_000024-3300031650-Ga0315539_100378215
Identity
- Kingdom:
- archaea
Quality
75.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-57
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pjvD02 | 6.20.270.20 | Special › Other non-globular › Carboxypeptidase Inhibitor; Chain A › LapD/MoxY periplasmic domain | 0.78 | 30.0 | 2.85e-01 | 93.2% | 30.0% |
| 4jbcA01 | 3.30.70.1690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 46.0 | 3.64e-01 | 95.5% | 40.2% |
| 3kzwA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.57 | 42.0 | 2.91e-01 | 81.8% | 37.3% |
| 7cijA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.56 | 46.0 | 2.80e-01 | 100.0% | 87.5% |
| 1hkqA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 2.82e-01 | 75.0% | 53.6% |
| 2c7yA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 45.0 | 2.64e-01 | 90.9% | 11.3% |
| 3f41A01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 40.0 | 2.50e-01 | 100.0% | 13.5% |
| 3bjoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.15e-01 | 86.4% | 57.3% |
| 2p14A00 | 3.40.91.50 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.52 | 35.0 | 2.40e-01 | 72.7% | 65.1% |
| 2i6tA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.52 | 43.0 | 3.08e-01 | 97.7% | 32.2% |
| 3guxA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 37.0 | 2.34e-01 | 77.3% | 46.6% |
| 6r8gB02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 43.0 | 2.96e-01 | 97.7% | 28.2% |
| 2x0jA02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 41.0 | 3.02e-01 | 100.0% | 32.2% |
| 1hyhC02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.50 | 42.0 | 2.98e-01 | 97.7% | 28.0% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4996490 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.67 | 45.0 | 3.02e-01 | 70.5% | 88.2% |
| 3593102 | 1016.1.1.0 ↗ | alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 | 0.66 | 53.0 | 3.91e-01 | 97.7% | 33.1% |
| 3698817 | 1016.1.1.1 ↗ | alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK | 0.65 | 52.0 | 4.08e-01 | 97.7% | 39.1% |
| 3627597 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 54.0 | 3.20e-01 | 100.0% | 53.4% |
| 4418047 | 7523.1.1.46 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lipoprotein_10+Lipoprotein_X | 0.63 | 44.0 | 2.58e-01 | 77.3% | 8.5% |
| 3604672 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 48.0 | 3.93e-01 | 95.5% | 68.4% |
| 3755628 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.59 | 46.0 | 2.86e-01 | 86.4% | 90.4% |
| 3990696 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 39.0 | 2.63e-01 | 88.6% | 16.5% |
| 3919881 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.56 | 40.0 | 2.80e-01 | 79.5% | 26.1% |
| 3644183 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 31.0 | 2.82e-01 | 93.2% | 35.9% |
| 4946579 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 45.0 | 2.60e-01 | 90.9% | 55.9% |
| 4938493 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 43.0 | 3.33e-01 | 88.6% | 44.8% |
| 4998593 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.55 | 38.0 | 2.87e-01 | 75.0% | 50.4% |
| 3396714 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 44.0 | 3.03e-01 | 100.0% | 26.9% |
| 4160852 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.53 | 43.0 | 3.02e-01 | 100.0% | 28.3% |
| 3723733 | 223.1.1.84 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PHY+GAF | 0.53 | 45.0 | 2.56e-01 | 93.2% | 13.5% |
| 3734132 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.53 | 45.0 | 2.73e-01 | 100.0% | 72.4% |
| 1307852 | 2007.2.3.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase | 0.52 | 40.0 | 2.49e-01 | 100.0% | 13.6% |
| 3483425 | 3745.1.1.0 ↗ | alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger | 0.52 | 43.0 | 2.51e-01 | 100.0% | 66.7% |
| 3734533 | 108.1.1.119 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › DUF7514 | 0.50 | 41.0 | 2.83e-01 | 95.5% | 31.2% |
| 4382025 | 279.1.1.1 ↗ | a+b complex topology › LDH C-terminal domain-like › LDH C-terminal domain-like › LDH C-terminal domain-like › Ldh_1_C | 0.50 | 42.0 | 2.93e-01 | 97.7% | 27.5% |
| 3664519 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.50 | 40.0 | 2.32e-01 | 90.9% | 65.4% |