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IMGVR_UViG_3300031760_000529-3300031760-Ga0326513_1000088319

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300031760_000529-3300031760-Ga0326513_1000088319 ↗
Kingdom:: archaea

Quality

67.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-96

PDB

Domain cluster: rep: IMGVR_UViG_3300001784_000289-3300001784-JGI20225J20221_10000041414__D5-96

D2 high residues 98-215

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3adyA00	3.55.50.60	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › DotD protein	0.73	51.0	5.47e-01	92.4%	83.3%
2p5zX02	3.55.50.10	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains	0.70	53.0	5.72e-01	93.2%	94.8%
1wruA02	3.55.50.10	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains	0.70	50.0	5.61e-01	89.8%	97.7%
2wzpR02	3.55.50.50	Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4	0.65	51.0	5.45e-01	88.1%	97.0%
2l66A00	2.10.260.10	Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D ›	0.62	23.0	3.33e-01	90.7%	71.7%
4qkyA02	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.54	29.0	3.47e-01	76.3%	79.7%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4954564	3070.1.1.0 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins	0.89	73.0	7.78e-01	92.4%	96.2%
4031358	3070.1.1.18 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF26674	0.81	60.0	6.60e-01	89.8%	94.7%
1124160	3070.1.1.9 ↗	a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Caud_bapl16_2nd	0.65	53.0	5.57e-01	94.1%	97.1%

D3 high residues 259-380

PDB

D4 high residues 417-576

PDB

D5 high residues 952-1085

PDB

Domain cluster: rep: IMGVR_UViG_2799112907_000002-2799112907-2800868825__D215-350

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01841.26 best	Transglut_core	24.5	3.90e-05	78.4%	99.1%

D6 medium residues 387-416_577-642

PDB

D7 medium residues 643-690_737-762

PDB

D8 medium residues 796-927

PDB

Domain cluster: rep: IMGVR_UViG_3300019376_000688-3300019376-Ga0187899_100218772__D21-119

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5cxmA00	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.66	45.0	5.20e-01	100.0%	93.9%
2qpzA00	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.65	45.0	5.00e-01	100.0%	89.3%
2e4qA00	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.64	45.0	4.96e-01	100.0%	88.0%
3gceA00	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.63	45.0	4.96e-01	100.0%	92.3%
6klsA01	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.61	43.0	4.95e-01	99.2%	100.0%
2jo6A00	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.61	43.0	4.71e-01	100.0%	89.1%
3d89A00	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.58	45.0	4.45e-01	100.0%	77.9%
2jmcA00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.57	24.0	3.10e-01	83.3%	64.9%
1u5kA01	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.54	27.0	3.34e-01	73.5%	76.8%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4954419	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.99	96.0	9.70e-01	98.5%	100.0%
3958173	4294.1.1.0 ↗	few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like	0.77	36.0	5.11e-01	77.3%	92.3%
3732808	4294.1.1.1 ↗	few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske	0.71	43.0	5.49e-01	83.3%	100.0%
4957682	66.1.1.1 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske	0.66	45.0	5.11e-01	100.0%	90.3%
4031542	66.1.1.2 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2	0.65	45.0	5.09e-01	100.0%	92.9%
4487967	66.1.1.1 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske	0.65	45.0	5.04e-01	100.0%	93.0%
4444869	66.1.1.1 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske	0.64	44.0	4.83e-01	100.0%	87.6%
4303651	66.1.1.1 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske	0.63	44.0	4.76e-01	100.0%	83.2%
3288034	66.1.1.2 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2	0.63	45.0	4.77e-01	100.0%	81.7%
4007351	66.1.1.2 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Rieske_2	0.63	45.0	4.95e-01	100.0%	90.7%
3910652	66.1.1.3 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Sol_Rieske_ferrdox	0.57	44.0	4.76e-01	100.0%	96.4%
3208301	66.1.1.3 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain › Sol_Rieske_ferrdox	0.54	43.0	4.53e-01	99.2%	92.5%
4019147	66.1.1.0 ↗	beta sandwiches › ISP domain › ISP domain › ISP domain	0.52	40.0	4.20e-01	100.0%	89.2%