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IMGVR_UViG_3300031760_006869-3300031760-Ga0326513_1000032111
Arc-VirIMGVR_UViG_3300031760_006869-3300031760-Ga0326513_1000032111
Identity
- Kingdom:
- archaea
Quality
56.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-107
Domain cluster:
rep: IMGVR_UViG_2558860120_000001-2558860120-2558933737__D8-131
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tj7A03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.68 | 35.0 | 4.26e-01 | 78.1% | 74.6% |
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.68 | 36.0 | 4.31e-01 | 79.0% | 76.4% |
| 5k29A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.66 | 40.0 | 4.19e-01 | 95.2% | 66.0% |
| 2vm6A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.65 | 47.0 | 4.25e-01 | 75.2% | 86.8% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 42.0 | 4.36e-01 | 99.0% | 74.0% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 35.0 | 3.96e-01 | 84.8% | 72.8% |
| 1h3lB00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.60 | 41.0 | 4.57e-01 | 98.1% | 94.9% |
| 3kp1E02 | 1.10.8.1000 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ornithine 4,5 aminomutase S component, alpha subunit-like | 0.60 | 35.0 | 4.20e-01 | 86.7% | 87.1% |
| 3i0pA01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.60 | 39.0 | 3.89e-01 | 93.3% | 63.9% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.57 | 37.0 | 4.18e-01 | 98.1% | 86.4% |
| 6gwuD00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.57 | 44.0 | 3.60e-01 | 83.8% | 60.4% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 43.0 | 4.00e-01 | 82.9% | 84.1% |
| 1vplA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 36.0 | 2.78e-01 | 84.8% | 29.4% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 38.0 | 3.59e-01 | 96.2% | 57.1% |
| 3ci0K02 | 1.10.40.60 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › EpsJ-like | 0.54 | 42.0 | 4.17e-01 | 90.5% | 78.8% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.54 | 31.0 | 3.45e-01 | 78.1% | 72.0% |
| 1g03A00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.53 | 41.0 | 3.80e-01 | 82.9% | 86.6% |
| 4f7nB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 35.0 | 3.27e-01 | 89.5% | 52.2% |
| 7eqeB01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 45.0 | 3.83e-01 | 97.1% | 69.8% |
| 4hstB03 | 1.10.1400.10 | Mainly Alpha › Orthogonal Bundle › Penicillin amidase (Acylase) alpha subunit, N-terminal domain › Aminohydrolase, alpha-helical knob region | 0.51 | 39.0 | 3.73e-01 | 84.8% | 89.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4926851 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 35.0 | 4.46e-01 | 85.7% | 86.7% |
| 3237595 | 616.1.1.21 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF4473 | 0.64 | 38.0 | 4.22e-01 | 82.9% | 74.1% |
| 3675500 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 37.0 | 4.03e-01 | 99.0% | 79.8% |
| 3962798 | 141.1.1.2 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › SQS_PSY | 0.55 | 42.0 | 3.48e-01 | 83.8% | 67.3% |
| 3214762 | 7060.1.1.1 ↗ | alpha arrays › ELMO domain › ELMO domain › ELMO domain › ELMO_CED12 | 0.54 | 42.0 | 3.55e-01 | 100.0% | 47.6% |
| 4928230 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.54 | 41.0 | 2.86e-01 | 81.9% | 56.4% |
| 3200990 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 37.0 | 3.30e-01 | 92.4% | 50.0% |
| 3460674 | 103.1.1.34 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PIR2-like_helical | 0.53 | 41.0 | 3.09e-01 | 82.9% | 73.0% |
| 3556225 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.53 | 40.0 | 3.48e-01 | 79.0% | 60.6% |
| 5009804 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.53 | 38.0 | 4.00e-01 | 99.0% | 83.2% |
| 3796068 | 148.1.3.40 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ORC5_lid | 0.52 | 36.0 | 3.77e-01 | 71.4% | 87.4% |
| 4997228 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.51 | 40.0 | 4.21e-01 | 81.9% | 92.6% |
| 3940024 | 7060.1.1.1 ↗ | alpha arrays › ELMO domain › ELMO domain › ELMO domain › ELMO_CED12 | 0.51 | 46.0 | 3.58e-01 | 100.0% | 59.6% |
| 3643197 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.50 | 36.0 | 3.76e-01 | 86.7% | 80.0% |
D2
medium
residues 188-263