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IMGVR_UViG_3300031760_006869-3300031760-Ga0326513_1000032120

Arc-Vir

IMGVR_UViG_3300031760_006869-3300031760-Ga0326513_1000032120

Identity

Kingdom:
archaea

Quality

85.0 mean pLDDT

Cluster

View cluster (26 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-65
PDB
Domain cluster: rep: OP056089.1__UYD72102.1__X__00002__D5-102
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 54.1 1.30e-14 60.9% 82.6%
D2 high residues 67-131
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.72 49.0 5.22e-01 72.3% 80.4%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 44.0 4.93e-01 76.9% 93.3%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 5.29e-01 95.4% 87.3%
4mloA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 48.0 4.94e-01 76.9% 82.0%
2k9qA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 40.0 4.80e-01 98.5% 100.0%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 5.05e-01 100.0% 85.9%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.00e-01 72.3% 73.3%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 45.0 4.75e-01 78.5% 93.0%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 3.97e-01 87.7% 54.3%
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 47.0 4.63e-01 86.2% 81.2%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 3.96e-01 76.9% 64.2%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 50.0 3.59e-01 100.0% 62.1%
3dkxA02 1.10.10.1480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Plasmid replication protein 0.52 37.0 3.72e-01 78.5% 75.0%
3tacB01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.52 42.0 3.57e-01 100.0% 54.3%
3zrgA00 1.10.10.2470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 38.0 3.80e-01 81.5% 95.5%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943189 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.74 51.0 5.42e-01 75.4% 85.5%
3969487 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 47.0 5.24e-01 70.8% 89.8%
3289875 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.72 46.0 4.10e-01 72.3% 46.7%
3947236 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.72 48.0 5.16e-01 72.3% 83.3%
3944775 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 50.0 5.19e-01 80.0% 80.0%
3586840 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.71 59.0 5.43e-01 92.3% 69.4%
3164420 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.71 47.0 4.98e-01 73.8% 80.0%
3281220 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 47.0 5.11e-01 70.8% 88.0%
2565056 101.1.1.2 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.70 45.0 4.76e-01 81.5% 74.1%
4377139 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.70 60.0 5.59e-01 93.8% 76.2%
4529419 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.70 60.0 5.74e-01 93.8% 81.3%
4055190 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 52.0 5.40e-01 90.8% 86.7%
4319964 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.69 48.0 5.11e-01 73.8% 87.3%
3979850 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.68 56.0 5.16e-01 95.4% 70.6%
3970811 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 57.0 5.26e-01 93.8% 71.8%
3974068 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.67 49.0 4.85e-01 78.5% 73.9%
3946141 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.67 57.0 5.31e-01 95.4% 77.5%
4583223 101.1.1.63 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.64 43.0 4.61e-01 73.8% 83.6%
4173465 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.62 41.0 4.37e-01 80.0% 81.8%
3645968 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 46.0 4.14e-01 95.4% 68.4%
3797375 101.1.2.588 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7515 0.56 40.0 3.63e-01 78.5% 69.5%
4129105 101.1.1.99 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF4096 0.54 42.0 3.92e-01 90.8% 71.1%
5003692 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.54 44.0 4.49e-01 95.4% 96.9%
5015219 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.51e-01 92.3% 55.8%