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IMGVR_UViG_3300031760_006869-3300031760-Ga0326513_1000032133
Arc-VirIMGVR_UViG_3300031760_006869-3300031760-Ga0326513_1000032133
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-110
Domain cluster:
rep: JN880423.1__AFJ21461.1__X__00006__D19-112
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04266.21 best | ASCH | 49.5 | 8.70e-13 | 100.0% | 98.1% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.85 | 81.0 | 6.92e-01 | 100.0% | 77.4% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.84 | 80.0 | 6.75e-01 | 100.0% | 74.2% |
| 2dp9A01 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.82 | 65.0 | 6.72e-01 | 100.0% | 89.0% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.74 | 68.0 | 6.21e-01 | 100.0% | 79.1% |
| 1s04A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.73 | 66.0 | 6.54e-01 | 100.0% | 94.5% |
| 1xneA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.73 | 65.0 | 6.46e-01 | 100.0% | 91.2% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.59 | 39.0 | 4.17e-01 | 100.0% | 77.4% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 40.0 | 3.84e-01 | 100.0% | 64.0% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.55 | 26.0 | 3.43e-01 | 91.6% | 89.8% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.55 | 50.0 | 3.76e-01 | 100.0% | 49.0% |
| 3dmbA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 48.0 | 4.33e-01 | 98.1% | 76.7% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 46.0 | 4.27e-01 | 98.1% | 88.7% |
| 2ln7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.52 | 47.0 | 4.26e-01 | 100.0% | 84.4% |
| 2pb7A01 | 2.30.280.10 | Mainly Beta › Roll › PUA domain-like › SRA-YDG | 0.52 | 48.0 | 4.00e-01 | 100.0% | 64.4% |
| 3g5tA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 41.0 | 2.96e-01 | 85.0% | 47.5% |
| 4y4qA00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.51 | 46.0 | 3.93e-01 | 100.0% | 89.7% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077279 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.98 | 87.0 | 8.33e-01 | 100.0% | 81.7% |
| 5070577 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.95 | 89.0 | 8.80e-01 | 100.0% | 93.6% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.94 | 86.0 | 8.50e-01 | 100.0% | 90.9% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.94 | 84.0 | 8.38e-01 | 100.0% | 90.0% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.94 | 84.0 | 8.19e-01 | 100.0% | 86.1% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.93 | 84.0 | 8.51e-01 | 100.0% | 95.2% |
| 4972117 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.92 | 85.0 | 8.08e-01 | 100.0% | 85.0% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.92 | 78.0 | 7.74e-01 | 100.0% | 85.5% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.91 | 81.0 | 7.65e-01 | 100.0% | 80.0% |
| 4155252 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.90 | 79.0 | 7.97e-01 | 100.0% | 93.3% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.89 | 78.0 | 7.58e-01 | 100.0% | 85.2% |
| 3165125 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.88 | 77.0 | 7.78e-01 | 100.0% | 93.3% |
| 3279326 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.87 | 70.0 | 7.63e-01 | 100.0% | 100.0% |
| 4998591 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.87 | 83.0 | 7.33e-01 | 100.0% | 82.8% |
| 4019865 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.87 | 83.0 | 7.33e-01 | 100.0% | 80.0% |
| 4995779 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.86 | 82.0 | 7.22e-01 | 100.0% | 96.6% |
| 5078127 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.86 | 64.0 | 7.18e-01 | 87.9% | 97.6% |
| 144031 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.85 | 81.0 | 6.92e-01 | 100.0% | 77.4% |
| 4995643 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.85 | 72.0 | 6.44e-01 | 100.0% | 66.2% |
| 4958692 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.85 | 80.0 | 7.03e-01 | 100.0% | 82.0% |
| 2105336 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.84 | 71.0 | 6.29e-01 | 100.0% | 63.8% |
| 5016521 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.84 | 72.0 | 6.60e-01 | 100.0% | 71.1% |
| 5035541 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.84 | 67.0 | 7.11e-01 | 100.0% | 94.7% |
| 5079450 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.84 | 71.0 | 6.39e-01 | 100.0% | 67.9% |
| 4608277 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.84 | 79.0 | 7.36e-01 | 100.0% | 96.9% |
| 5023996 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.84 | 78.0 | 7.67e-01 | 100.0% | 92.9% |
| 4940231 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.83 | 70.0 | 6.43e-01 | 100.0% | 70.7% |
| 4122172 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.83 | 70.0 | 6.66e-01 | 100.0% | 76.6% |
| 4229723 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.83 | 70.0 | 6.15e-01 | 100.0% | 63.3% |
| 178 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.82 | 65.0 | 6.25e-01 | 100.0% | 74.2% |
| 4953076 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 76.0 | 7.33e-01 | 100.0% | 89.2% |
| 4940646 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 63.0 | 6.88e-01 | 100.0% | 96.7% |
| 5023730 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.81 | 70.0 | 6.27e-01 | 100.0% | 67.6% |
| 177 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.81 | 76.0 | 6.63e-01 | 100.0% | 77.8% |
| 3944719 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 76.0 | 6.85e-01 | 100.0% | 77.0% |
| 4970789 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.79 | 70.0 | 6.36e-01 | 100.0% | 72.9% |
| 5073325 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.77 | 70.0 | 6.31e-01 | 100.0% | 74.3% |
| 5014837 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.76 | 72.0 | 5.97e-01 | 100.0% | 69.5% |
| 3603398 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.75 | 70.0 | 7.02e-01 | 100.0% | 99.1% |
| 4929736 | 1.1.9.22 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 | 0.74 | 68.0 | 5.72e-01 | 100.0% | 73.1% |
| 3208149 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 55.0 | 5.11e-01 | 100.0% | 66.2% |
| 4013185 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 57.0 | 5.04e-01 | 100.0% | 60.0% |
| 3199787 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 55.0 | 5.09e-01 | 100.0% | 68.1% |
| 4999514 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 62.0 | 5.52e-01 | 100.0% | 81.3% |
| 3199622 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.61 | 55.0 | 4.96e-01 | 100.0% | 79.3% |
| 3723431 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.59 | 52.0 | 4.47e-01 | 100.0% | 67.4% |
| 4027536 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.58 | 40.0 | 4.28e-01 | 99.1% | 82.1% |
| 4996077 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.52 | 42.0 | 3.09e-01 | 88.8% | 42.9% |
| 3399868 | 219.1.1.24 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Herpes_teg_N | 0.52 | 46.0 | 3.62e-01 | 100.0% | 74.6% |
| 3652827 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.51 | 33.0 | 3.13e-01 | 89.7% | 51.9% |
| 3599865 | 304.34.1.0 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases | 0.51 | 37.0 | 3.02e-01 | 89.7% | 39.5% |