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IMGVR_UViG_3300031760_006869-3300031760-Ga0326513_1000032143
Arc-VirIMGVR_UViG_3300031760_006869-3300031760-Ga0326513_1000032143
Identity
- Kingdom:
- archaea
Quality
69.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-166
Domain cluster:
rep: OL597546.1__UUB23297.1__X__00001__D24-147
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6le1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 27.0 | 3.86e-01 | 100.0% | 98.5% |
| 3nlcA01 | 3.30.70.2700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 26.0 | 3.56e-01 | 85.8% | 92.1% |
| 1l2mA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.53 | 28.0 | 3.21e-01 | 86.4% | 66.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083161 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.82 | 60.0 | 6.40e-01 | 87.0% | 84.1% |
| 3954964 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.80 | 61.0 | 6.51e-01 | 89.5% | 87.6% |
| 5003309 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.77 | 56.0 | 6.24e-01 | 88.9% | 92.3% |
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.77 | 60.0 | 6.42e-01 | 88.9% | 92.1% |
| 3166306 | 50.1.1.4 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › DUF2213 | 0.75 | 61.0 | 6.32e-01 | 88.9% | 89.5% |
| 3945977 | 50.1.1.4 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › DUF2213 | 0.72 | 62.0 | 6.19e-01 | 88.9% | 88.5% |
| 3165956 | 2007.2.4.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphoinositide phosphatase › Mu-like_Pro | 0.72 | 57.0 | 6.15e-01 | 89.5% | 95.7% |
| 3600035 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 27.0 | 4.06e-01 | 84.6% | 92.3% |
| 3169216 | 1.1.8.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › POP1_C | 0.63 | 33.0 | 3.61e-01 | 100.0% | 60.6% |
| 5034097 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 29.0 | 3.88e-01 | 85.8% | 88.2% |
| 3320357 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.57 | 31.0 | 3.86e-01 | 87.7% | 86.7% |
| 4979807 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.54 | 27.0 | 3.31e-01 | 81.5% | 75.0% |
| 3666747 | 2492.1.1.8 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 | 0.53 | 31.0 | 3.26e-01 | 96.3% | 62.1% |
| 5058995 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.51 | 24.0 | 3.02e-01 | 83.3% | 73.7% |
| 3172535 | 304.9.1.126 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF29325 | 0.50 | 29.0 | 3.51e-01 | 85.8% | 88.0% |
| 4934427 | 304.109.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e | 0.50 | 23.0 | 2.88e-01 | 83.3% | 69.0% |
D2
high
residues 187-217_231-291