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IMGVR_UViG_3300031867_000745-3300031867-Ga0326511_100014561
Arc-VirIMGVR_UViG_3300031867_000745-3300031867-Ga0326511_100014561
Identity
- Kingdom:
- archaea
Quality
73.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-111
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.77 | 53.0 | 5.66e-01 | 70.5% | 100.0% |
| 4anoA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.76 | 69.0 | 5.11e-01 | 96.6% | 62.7% |
| 6vvoE02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.76 | 61.0 | 5.90e-01 | 86.4% | 89.9% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.75 | 38.0 | 4.36e-01 | 90.9% | 66.2% |
| 1vhnA02 | 1.10.1200.80 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 | 0.74 | 56.0 | 6.13e-01 | 81.8% | 100.0% |
| 2a0uB01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.73 | 65.0 | 5.36e-01 | 100.0% | 62.5% |
| 2oocB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.72 | 61.0 | 5.76e-01 | 97.7% | 77.1% |
| 4dvyP03 | 1.20.120.1270 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CagA exotoxin domain III | 0.72 | 64.0 | 5.14e-01 | 100.0% | 51.8% |
| 1ynjJ01 | 1.10.1790.20 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › | 0.69 | 50.0 | 4.54e-01 | 75.0% | 96.6% |
| 4k7bA00 | 1.20.120.1740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sodium ion translocating NADH-quinone reductase subunit C-like | 0.66 | 51.0 | 4.76e-01 | 83.0% | 72.1% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.66 | 54.0 | 5.22e-01 | 90.9% | 86.0% |
| 8etcb01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 59.0 | 5.00e-01 | 100.0% | 91.1% |
| 2e87A01 | 1.20.120.1190 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 58.0 | 4.73e-01 | 98.9% | 83.1% |
| 7kdfB01 | 1.10.418.60 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Nuf2 subunit | 0.62 | 53.0 | 4.50e-01 | 95.5% | 80.1% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.58 | 39.0 | 3.54e-01 | 70.5% | 72.6% |
| 6opmD01 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.57 | 47.0 | 3.44e-01 | 88.6% | 61.8% |
| 3eoqB02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 42.0 | 3.30e-01 | 78.4% | 89.1% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 46.0 | 4.50e-01 | 88.6% | 100.0% |
| 2hyjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 41.0 | 3.58e-01 | 80.7% | 78.9% |
| 2qwtA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 49.0 | 3.99e-01 | 97.7% | 74.9% |
| 3lwjA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 42.0 | 3.23e-01 | 93.2% | 37.3% |
| 4pfyA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.54 | 42.0 | 3.12e-01 | 85.2% | 92.9% |
| 2p0tA01 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.53 | 35.0 | 3.68e-01 | 83.0% | 76.3% |
| 3ripA02 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.50 | 39.0 | 2.87e-01 | 87.5% | 53.0% |
| 1n00A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.50 | 29.0 | 3.16e-01 | 73.9% | 67.1% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4252460 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.80 | 63.0 | 4.17e-01 | 85.2% | 22.5% |
| 3969061 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.78 | 64.0 | 4.24e-01 | 89.8% | 23.3% |
| 3805763 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.75 | 54.0 | 4.46e-01 | 100.0% | 43.3% |
| 5066728 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.74 | 54.0 | 5.47e-01 | 76.1% | 87.1% |
| 3963859 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.72 | 54.0 | 3.61e-01 | 83.0% | 21.0% |
| 3839496 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.69 | 61.0 | 4.73e-01 | 100.0% | 53.0% |
| 3837969 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.68 | 55.0 | 3.67e-01 | 86.4% | 26.8% |
| 3685632 | 5073.1.2.12 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Copper efflux ATPase transmembrane domain › PF30968 | 0.67 | 60.0 | 4.33e-01 | 100.0% | 50.0% |
| 4664739 | 5060.1.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 | 0.66 | 57.0 | 5.15e-01 | 94.3% | 83.3% |
| 4995193 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.66 | 61.0 | 5.03e-01 | 100.0% | 87.3% |
| 5042223 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.65 | 59.0 | 5.02e-01 | 98.9% | 82.1% |
| 3800855 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.65 | 57.0 | 4.86e-01 | 97.7% | 69.0% |
| 4986966 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.65 | 59.0 | 4.85e-01 | 98.9% | 85.8% |
| 5000174 | 601.16.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase | 0.64 | 52.0 | 5.05e-01 | 90.9% | 92.0% |
| 5047828 | 601.30.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N | 0.63 | 56.0 | 4.57e-01 | 98.9% | 83.0% |
| 3571351 | 5086.1.1.116 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Tcp11 | 0.62 | 53.0 | 4.62e-01 | 93.2% | 97.8% |
| 3592107 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.60 | 45.0 | 4.16e-01 | 80.7% | 67.0% |
| 3340945 | 9001.1.1.1 ↗ | alpha bundles › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TRAM_LAG1_CLN8 | 0.59 | 51.0 | 3.82e-01 | 100.0% | 80.9% |
| 3627935 | 7515.1.1.6 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Phosphodiest | 0.58 | 47.0 | 3.19e-01 | 88.6% | 99.7% |
| 4626172 | 7579.1.1.92 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Abhydrolase_6 | 0.54 | 45.0 | 3.28e-01 | 93.2% | 62.9% |
| 4393144 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.52 | 45.0 | 3.40e-01 | 98.9% | 68.7% |
| 2526326 | 4974.1.2.0 ↗ | alpha bundles › CRISPR-Cas system first helical domain › CRISPR-Cas system first helical domain | 0.52 | 45.0 | 3.61e-01 | 90.9% | 56.0% |