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IMGVR_UViG_3300031867_006616-3300031867-Ga0326511_1000059327
Arc-VirIMGVR_UViG_3300031867_006616-3300031867-Ga0326511_1000059327
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 69-138
Domain cluster:
rep: MZ333134.1__QXG07748.1__X__00016__D390-489
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f0cA02 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.74 | 64.0 | 5.68e-01 | 100.0% | 82.7% |
| 2bseA00 | 2.60.40.1830 | Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain | 0.72 | 63.0 | 5.52e-01 | 100.0% | 83.2% |
| 1bagA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 48.0 | 4.66e-01 | 97.1% | 69.2% |
| 1k0eB00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.61 | 48.0 | 2.99e-01 | 87.1% | 56.8% |
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.61 | 42.0 | 3.56e-01 | 72.9% | 91.7% |
| 6dw1A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.61 | 46.0 | 3.31e-01 | 82.9% | 51.9% |
| 4gklA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 46.0 | 4.38e-01 | 98.6% | 69.3% |
| 3jafA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.60 | 45.0 | 3.27e-01 | 82.9% | 55.5% |
| 6d6tA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.60 | 45.0 | 3.26e-01 | 82.9% | 52.4% |
| 1xs1A00 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.59 | 49.0 | 3.74e-01 | 100.0% | 65.3% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.57 | 46.0 | 4.27e-01 | 97.1% | 95.9% |
| 4blqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 50.0 | 3.38e-01 | 100.0% | 52.1% |
| 6fhvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 3.78e-01 | 81.4% | 70.4% |
| 6xw5A01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.56 | 46.0 | 3.62e-01 | 98.6% | 97.7% |
| 3rtxA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.56 | 42.0 | 3.22e-01 | 81.4% | 62.4% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 46.0 | 4.11e-01 | 100.0% | 63.1% |
| 4pbpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.37e-01 | 100.0% | 89.8% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.53 | 42.0 | 3.97e-01 | 97.1% | 71.1% |
| 2d0bA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.53 | 39.0 | 3.62e-01 | 78.6% | 71.9% |
| 1sefA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 43.0 | 3.79e-01 | 100.0% | 63.0% |
| 1tq5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 44.0 | 3.88e-01 | 100.0% | 63.9% |
| 1qu0C00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.37e-01 | 100.0% | 51.4% |
| 2cqvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.79e-01 | 100.0% | 64.0% |
| 3lb9A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.51 | 43.0 | 3.30e-01 | 100.0% | 57.1% |
| 1v5mA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.08e-01 | 80.0% | 62.5% |
| 2qf4A01 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.51 | 42.0 | 4.10e-01 | 98.6% | 88.6% |
| 1wojA00 | 3.90.1740.10 | Alpha Beta › Alpha-Beta Complex › 2',3'-cyclic nucleotide 3'-phosphodiesterase fold › 2',3'-cyclic nucleotide 3'-phosphodiesterase superfamily | 0.51 | 38.0 | 2.72e-01 | 80.0% | 87.1% |
| 5zbeA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.74e-01 | 100.0% | 69.2% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3623628 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.68 | 46.0 | 2.90e-01 | 70.0% | 23.2% |
| 4968206 | 331.1.1.1 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP | 0.67 | 53.0 | 4.99e-01 | 85.7% | 96.5% |
| 3510509 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.67 | 46.0 | 3.59e-01 | 72.9% | 60.6% |
| 4941159 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.66 | 50.0 | 4.40e-01 | 81.4% | 81.0% |
| 3221443 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.66 | 47.0 | 3.05e-01 | 77.1% | 93.3% |
| 5003322 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.65 | 51.0 | 4.69e-01 | 85.7% | 90.0% |
| 5017789 | 331.1.1.26 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › Fer4 | 0.64 | 51.0 | 4.01e-01 | 87.1% | 56.0% |
| 4060837 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.64 | 49.0 | 3.32e-01 | 82.9% | 31.0% |
| 3265963 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.64 | 48.0 | 3.89e-01 | 81.4% | 77.0% |
| 3389767 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.63 | 48.0 | 3.35e-01 | 82.9% | 52.8% |
| 3936858 | 11.12.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD,Neur_chan_memb | 0.62 | 47.0 | 2.89e-01 | 82.9% | 26.9% |
| 3933720 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.61 | 47.0 | 3.35e-01 | 82.9% | 54.8% |
| 3923409 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.61 | 46.0 | 3.22e-01 | 81.4% | 48.7% |
| 3798241 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.61 | 47.0 | 3.31e-01 | 82.9% | 51.8% |
| 3934879 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.61 | 46.0 | 3.21e-01 | 82.9% | 45.8% |
| 4375009 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.60 | 46.0 | 3.23e-01 | 82.9% | 51.6% |
| 3629613 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.60 | 46.0 | 3.40e-01 | 84.3% | 60.5% |
| 3402409 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.60 | 46.0 | 3.29e-01 | 82.9% | 57.1% |
| 3574009 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.60 | 46.0 | 3.22e-01 | 82.9% | 51.7% |
| 1294200 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.60 | 46.0 | 3.25e-01 | 82.9% | 52.1% |
| 5034475 | 11.1.1.62 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Peptidase_C25_C | 0.60 | 51.0 | 4.73e-01 | 100.0% | 76.7% |
| 3227536 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.60 | 45.0 | 3.20e-01 | 82.9% | 53.5% |
| 3486267 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.59 | 45.0 | 3.13e-01 | 82.9% | 53.9% |
| 3926935 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.59 | 44.0 | 3.20e-01 | 81.4% | 82.8% |
| 3998747 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.59 | 45.0 | 3.05e-01 | 82.9% | 43.0% |
| 3477781 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.59 | 43.0 | 3.14e-01 | 80.0% | 83.7% |
| 4947558 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.59 | 47.0 | 4.39e-01 | 90.0% | 93.3% |
| 3231960 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.59 | 46.0 | 3.32e-01 | 85.7% | 94.1% |
| 5054987 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 48.0 | 4.65e-01 | 100.0% | 87.1% |
| 3624236 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.58 | 43.0 | 3.09e-01 | 81.4% | 83.9% |
| 4058778 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.58 | 47.0 | 3.14e-01 | 94.3% | 77.0% |
| 3222273 | 11.12.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like | 0.57 | 44.0 | 3.30e-01 | 84.3% | 60.6% |
| 4995002 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.57 | 48.0 | 3.01e-01 | 92.9% | 43.5% |
| 2458442 | 11.1.1.62 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Peptidase_C25_C | 0.57 | 46.0 | 4.43e-01 | 98.6% | 80.5% |
| 4991092 | 3370.1.1.0 ↗ | beta sandwiches › Lactococcin 972 › Lactococcin 972 › Lactococcin 972 | 0.57 | 46.0 | 4.52e-01 | 98.6% | 93.8% |
| 5024892 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.56 | 44.0 | 3.17e-01 | 84.3% | 36.8% |
| 4952273 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 45.0 | 4.41e-01 | 97.1% | 87.5% |
| 3928021 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.55 | 41.0 | 2.99e-01 | 84.3% | 59.2% |
| 4983619 | 7072.1.1.0 ↗ | beta sandwiches › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain | 0.55 | 43.0 | 3.48e-01 | 92.9% | 42.0% |
| 3572793 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.53 | 39.0 | 3.00e-01 | 82.9% | 84.1% |
| 3881590 | 10.1.1.5 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin | 0.53 | 44.0 | 3.34e-01 | 100.0% | 90.2% |
| 3928205 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.53 | 39.0 | 2.93e-01 | 81.4% | 85.9% |
| 3290127 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 36.0 | 2.58e-01 | 72.9% | 68.6% |
| 3499149 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 42.0 | 2.59e-01 | 90.0% | 36.3% |
| 3504531 | 12.3.1.54 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Trefoil | 0.51 | 41.0 | 2.93e-01 | 97.1% | 65.7% |
| 4010516 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.50 | 42.0 | 3.45e-01 | 100.0% | 55.2% |