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IMGVR_UViG_3300031867_006616-3300031867-Ga0326511_100005933

Arc-Vir

IMGVR_UViG_3300031867_006616-3300031867-Ga0326511_100005933

Quality

80.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-54
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y0uA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 79.0 6.27e-01 100.0% 57.3%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 6.45e-01 100.0% 77.6%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.91e-01 100.0% 78.9%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 6.22e-01 100.0% 90.5%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 4.89e-01 100.0% 41.9%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 4.67e-01 100.0% 41.8%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 6.18e-01 97.8% 83.6%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.60e-01 97.8% 62.7%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 6.07e-01 100.0% 90.0%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.31e-01 100.0% 64.0%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 60.0 5.95e-01 91.3% 88.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 6.09e-01 97.8% 77.6%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 6.25e-01 97.8% 92.0%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 5.49e-01 76.1% 78.3%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.50e-01 100.0% 58.7%
2ga1A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 5.12e-01 87.0% 59.2%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.23e-01 97.8% 56.6%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.84e-01 100.0% 85.7%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 5.21e-01 100.0% 56.3%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 4.90e-01 100.0% 53.8%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.46e-01 97.8% 66.7%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 5.59e-01 97.8% 70.1%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 5.91e-01 97.8% 85.2%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.97e-01 97.8% 88.5%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 5.20e-01 87.0% 70.5%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.32e-01 100.0% 69.2%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.73 60.0 3.92e-01 100.0% 31.1%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.49e-01 100.0% 83.3%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.71 61.0 4.46e-01 100.0% 37.4%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.36e-01 100.0% 74.6%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.39e-01 100.0% 83.6%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.90e-01 100.0% 76.2%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.19e-01 100.0% 40.8%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 4.89e-01 100.0% 67.4%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 4.70e-01 100.0% 69.4%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.99e-01 91.3% 72.4%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 50.0 4.51e-01 89.1% 63.4%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 4.58e-01 100.0% 65.9%
4x0qA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.65 53.0 3.86e-01 97.8% 72.9%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.61 49.0 4.25e-01 100.0% 73.5%
1o82A00 1.20.225.10 Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 0.60 46.0 4.11e-01 89.1% 71.4%
3d5lB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 47.0 3.80e-01 97.8% 43.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5007105 101.1.2.674 alpha arrays › HTH › HTH › winged helix domain › PF29648 0.88 80.0 7.53e-01 100.0% 83.6%
4949987 101.1.2.674 alpha arrays › HTH › HTH › winged helix domain › PF29648 0.87 77.0 7.53e-01 97.8% 94.0%
4954539 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 70.0 6.83e-01 91.3% 86.0%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.82 63.0 5.82e-01 100.0% 65.0%
3942695 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 71.0 6.34e-01 97.8% 76.9%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.82 69.0 5.64e-01 95.7% 56.5%
3385441 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 70.0 6.01e-01 100.0% 69.3%
3970053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 68.0 6.73e-01 100.0% 92.0%
4998548 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 6.41e-01 100.0% 90.0%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 66.0 6.17e-01 97.8% 76.7%
3290024 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 69.0 5.77e-01 100.0% 58.7%
3975610 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 66.0 5.85e-01 100.0% 64.3%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 58.0 5.25e-01 84.8% 58.5%
4606780 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 68.0 6.25e-01 100.0% 80.0%
4404485 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 67.0 6.24e-01 100.0% 76.7%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.78 57.0 4.97e-01 84.8% 50.7%
4979728 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 66.0 5.42e-01 97.8% 52.9%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 60.0 5.34e-01 89.1% 62.9%
5062037 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.77 64.0 6.34e-01 97.8% 96.0%
3958811 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 66.0 4.82e-01 100.0% 45.4%
3972272 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.77 67.0 5.73e-01 100.0% 62.7%
5059633 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.77 66.0 6.28e-01 100.0% 96.4%
3972270 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.77 62.0 5.51e-01 97.8% 61.4%
3286659 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 67.0 5.86e-01 100.0% 75.7%
3974013 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.76 65.0 6.01e-01 97.8% 76.7%
3588225 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.76 58.0 4.33e-01 84.8% 33.3%
5052142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 62.0 6.24e-01 97.8% 95.6%
3990848 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 65.0 6.17e-01 100.0% 83.6%
3860590 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.76 65.0 6.40e-01 100.0% 98.0%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 60.0 5.58e-01 91.3% 71.7%
3590553 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.76 58.0 5.72e-01 84.8% 80.0%
5046692 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 62.0 6.31e-01 97.8% 97.8%
4941526 101.1.2.100 alpha arrays › HTH › HTH › winged helix domain › FeoC 0.75 64.0 6.11e-01 100.0% 100.0%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.75 64.0 5.52e-01 97.8% 61.3%
4047135 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 63.0 6.19e-01 97.8% 92.0%
4007596 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.75 60.0 5.91e-01 91.3% 98.0%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.75 57.0 5.31e-01 87.0% 66.7%
5044655 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 63.0 6.22e-01 97.8% 94.0%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.75 55.0 4.99e-01 84.8% 56.9%
2761 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.74 63.0 5.21e-01 100.0% 56.3%
5052610 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 63.0 5.83e-01 97.8% 76.7%
5056141 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 62.0 5.90e-01 97.8% 83.6%
5037302 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 61.0 5.68e-01 97.8% 76.7%
3568862 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.73 56.0 5.06e-01 84.8% 60.0%
3985435 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 56.0 5.89e-01 97.8% 100.0%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.73 56.0 4.23e-01 87.0% 35.0%
5032601 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 61.0 5.86e-01 97.8% 83.6%
3601807 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 54.0 3.00e-01 80.4% 5.9%
3389608 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.72 59.0 5.84e-01 100.0% 90.0%
4541333 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 57.0 5.62e-01 91.3% 92.0%
4968115 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 56.0 4.98e-01 91.3% 60.0%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 55.0 5.05e-01 91.3% 67.7%
5068678 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 56.0 5.20e-01 91.3% 73.3%
3283604 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.70 57.0 4.60e-01 97.8% 46.0%
5072420 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 54.0 5.36e-01 89.1% 84.0%
4948652 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.55e-01 97.8% 95.6%
3981690 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.68 55.0 4.58e-01 100.0% 53.7%
3742476 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 51.0 4.47e-01 87.0% 67.1%
5062184 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.66 55.0 5.11e-01 97.8% 75.0%
4659976 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.66 50.0 3.68e-01 89.1% 29.4%
5078302 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.60 47.0 3.91e-01 97.8% 87.0%
3590374 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.59 46.0 4.48e-01 100.0% 89.1%
D2 high residues 70-121
PDB