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IMGVR_UViG_3300031933_000299-3300031933-Ga0326349_100026859

Arc-Vir

IMGVR_UViG_3300031933_000299-3300031933-Ga0326349_100026859

Identity

Kingdom:
archaea

Quality

67.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-54
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 47.0 3.92e-01 89.6% 77.2%
6bu2A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.60 46.0 3.34e-01 87.5% 89.3%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 43.0 2.69e-01 87.5% 12.7%
3u4yA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 3.00e-01 97.9% 37.0%
4mveA00 2.40.128.580 Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain 0.59 48.0 3.45e-01 93.8% 49.0%
3mcaB01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.57 45.0 3.69e-01 89.6% 66.7%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.57 40.0 3.19e-01 77.1% 41.3%
3f3fD01 2.20.25.500 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.55 42.0 4.19e-01 87.5% 94.1%
2ostD00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.55 44.0 3.37e-01 95.8% 82.7%
4wfsA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 36.0 2.38e-01 91.7% 14.9%
1ospO02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.55 43.0 3.11e-01 89.6% 39.7%
2o7rA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 41.0 2.55e-01 85.4% 28.7%
3jbtA05 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.76e-01 100.0% 19.1%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 37.0 3.07e-01 75.0% 56.8%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 45.0 3.99e-01 100.0% 67.1%
1zxuA00 2.40.160.200 Mainly Beta › Beta Barrel › Porin › LURP1-related 0.53 40.0 2.91e-01 89.6% 83.3%
7t4dA01 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.52 39.0 2.42e-01 83.3% 82.4%
2nwvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.52 36.0 2.92e-01 77.1% 44.6%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.52 44.0 3.04e-01 100.0% 38.4%
4zgfA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.51 43.0 3.18e-01 100.0% 36.9%
5cxdB01 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.51 34.0 2.69e-01 70.8% 72.5%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.51 42.0 4.05e-01 100.0% 87.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3348231 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 55.0 4.93e-01 100.0% 74.3%
4926892 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.56 43.0 3.33e-01 87.5% 71.3%
4994455 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 41.0 3.40e-01 87.5% 100.0%
3579675 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 45.0 3.52e-01 100.0% 55.8%
4129145 5.1.3.23 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.54 45.0 2.87e-01 100.0% 25.5%
3645249 10.32.1.37 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin 0.53 38.0 2.59e-01 83.3% 86.8%
6662 4276.1.1.1 ↗ a+b two layers › XisI-like › XisI-like › XisI-like › XisI 0.52 36.0 2.92e-01 77.1% 44.6%
3356554 10.32.1.37 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin 0.52 40.0 2.81e-01 91.7% 93.5%
3660342 2003.1.5.31 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.52 39.0 2.37e-01 91.7% 77.4%
3473908 220.1.1.157 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29715 0.51 35.0 2.62e-01 100.0% 23.0%
3302856 10.32.1.37 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin 0.50 41.0 2.73e-01 100.0% 86.0%
3800122 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.50 39.0 2.86e-01 97.9% 53.0%