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IMGVR_UViG_3300031933_000299-3300031933-Ga0326349_100026864
Arc-VirIMGVR_UViG_3300031933_000299-3300031933-Ga0326349_100026864
Identity
- Kingdom:
- archaea
Quality
66.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-50
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1l1dA00 | 2.170.150.20 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. | 0.61 | 44.0 | 3.20e-01 | 100.0% | 24.3% |
| 3ep6B01 | 3.30.360.50 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › S-adenosylmethionine decarboxylase | 0.61 | 38.0 | 3.92e-01 | 71.4% | 63.4% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.59 | 40.0 | 2.95e-01 | 73.8% | 48.1% |
| 1mvfD00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.58 | 39.0 | 3.87e-01 | 100.0% | 59.1% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.58 | 49.0 | 4.00e-01 | 100.0% | 51.2% |
| 7nz1G01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.56 | 40.0 | 3.19e-01 | 78.6% | 74.0% |
| 2fiwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 42.0 | 3.08e-01 | 97.6% | 83.1% |
| 2zihC00 | 1.10.3630.10 | Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like | 0.54 | 41.0 | 2.54e-01 | 88.1% | 44.8% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 45.0 | 3.60e-01 | 100.0% | 62.4% |
| 2eshA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 3.23e-01 | 95.2% | 46.5% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.52 | 43.0 | 3.98e-01 | 97.6% | 82.5% |
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 37.0 | 2.73e-01 | 95.2% | 81.9% |
| 5vogA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 34.0 | 2.35e-01 | 73.8% | 59.7% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4085449 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.67 | 44.0 | 3.66e-01 | 100.0% | 34.7% |
| 3368713 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.66 | 45.0 | 3.77e-01 | 76.2% | 40.0% |
| 4959387 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.65 | 42.0 | 4.21e-01 | 100.0% | 57.8% |
| 5045869 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 46.0 | 3.29e-01 | 78.6% | 32.8% |
| 4993826 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.64 | 40.0 | 3.88e-01 | 100.0% | 50.0% |
| 4272869 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.64 | 47.0 | 4.25e-01 | 85.7% | 64.6% |
| 4992345 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.63 | 39.0 | 3.91e-01 | 100.0% | 51.1% |
| 4990060 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.63 | 39.0 | 3.90e-01 | 100.0% | 54.5% |
| 4005331 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.62 | 40.0 | 3.87e-01 | 100.0% | 52.0% |
| 3813009 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.60 | 41.0 | 2.44e-01 | 73.8% | 75.8% |
| 3984485 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.58 | 38.0 | 3.21e-01 | 100.0% | 32.5% |
| 5055279 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.58 | 43.0 | 2.82e-01 | 92.9% | 17.1% |
| 4955487 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.56 | 37.0 | 3.64e-01 | 100.0% | 51.1% |
| 3608945 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 37.0 | 2.62e-01 | 78.6% | 44.4% |
| 3597211 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.54 | 37.0 | 2.62e-01 | 81.0% | 43.2% |
| 4929676 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.54 | 36.0 | 3.58e-01 | 71.4% | 65.9% |
| 5031005 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.54 | 35.0 | 3.33e-01 | 100.0% | 41.8% |
| 3716899 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.53 | 41.0 | 2.44e-01 | 97.6% | 25.7% |
| 4958959 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.52 | 40.0 | 4.01e-01 | 90.5% | 100.0% |
| 5058860 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.52 | 34.0 | 3.21e-01 | 76.2% | 52.7% |
| 4933873 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.52 | 34.0 | 3.23e-01 | 100.0% | 49.1% |
| 5065458 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.52 | 35.0 | 3.17e-01 | 78.6% | 50.0% |
| 4934374 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.51 | 33.0 | 3.21e-01 | 81.0% | 54.0% |
| 3886725 | 11.1.1.271 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_6 | 0.51 | 40.0 | 2.84e-01 | 95.2% | 53.9% |
| 3247481 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.51 | 33.0 | 3.02e-01 | 71.4% | 36.7% |
| 5065699 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.51 | 35.0 | 3.45e-01 | 100.0% | 51.1% |
| 5058522 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.50 | 34.0 | 3.24e-01 | 76.2% | 74.1% |
| 5031899 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.50 | 34.0 | 3.49e-01 | 100.0% | 52.5% |
| 4955687 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.50 | 34.0 | 3.35e-01 | 78.6% | 83.0% |
| 5070516 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.50 | 34.0 | 3.25e-01 | 78.6% | 75.0% |
| 5059110 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.50 | 33.0 | 3.32e-01 | 73.8% | 64.4% |