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IMGVR_UViG_3300031933_000299-3300031933-Ga0326349_10002687
Arc-VirIMGVR_UViG_3300031933_000299-3300031933-Ga0326349_10002687
Identity
- Kingdom:
- archaea
Quality
72.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-62
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01428.24 best | zf-AN1 | 49.3 | 5.90e-13 | 59.7% | 70.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wfeA00 | 4.10.1110.10 | Few Secondary Structures › Irregular › Zf-an1 domain › AN1-like Zinc finger | 0.84 | 55.0 | 4.87e-01 | 96.8% | 48.8% |
| 1wysA00 | 4.10.1110.10 | Few Secondary Structures › Irregular › Zf-an1 domain › AN1-like Zinc finger | 0.78 | 49.0 | 4.60e-01 | 93.5% | 53.3% |
| 1xa6A02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.72 | 46.0 | 4.44e-01 | 93.5% | 58.0% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.61 | 40.0 | 4.24e-01 | 100.0% | 76.4% |
| 1wfkA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 51.0 | 4.75e-01 | 98.4% | 74.0% |
| 5cm2Z00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 33.0 | 2.40e-01 | 83.9% | 18.5% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.51 | 30.0 | 2.95e-01 | 83.9% | 51.5% |
| 3p9aF00 | 1.10.132.80 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.50 | 37.0 | 2.98e-01 | 82.3% | 63.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3434753 | 386.1.1.212 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-AN1 | 0.91 | 57.0 | 6.40e-01 | 93.5% | 80.0% |
| 4023139 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.84 | 56.0 | 3.76e-01 | 91.9% | 20.5% |
| 8135 | 376.1.5.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › AN1-like Zinc finger › zf-AN1 | 0.84 | 55.0 | 4.87e-01 | 96.8% | 48.8% |
| 3687105 | 376.1.5.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › AN1-like Zinc finger › zf-AN1 | 0.82 | 55.0 | 6.11e-01 | 91.9% | 86.0% |
| 3434752 | 376.1.5.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › AN1-like Zinc finger › zf-AN1 | 0.80 | 53.0 | 6.07e-01 | 93.5% | 93.3% |
| 3201162 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.78 | 42.0 | 3.97e-01 | 85.5% | 44.0% |
| 158775 | 376.1.5.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › AN1-like Zinc finger › zf-AN1 | 0.77 | 50.0 | 5.01e-01 | 95.2% | 65.1% |
| 5024734 | 375.1.1.323 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Arc_trans_TRASH | 0.73 | 43.0 | 5.16e-01 | 96.8% | 92.5% |
| 3893688 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.71 | 45.0 | 4.13e-01 | 93.5% | 50.0% |
| 3548118 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.69 | 42.0 | 4.67e-01 | 90.3% | 78.0% |
| 4926891 | 377.1.1.126 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH | 0.68 | 44.0 | 4.98e-01 | 95.2% | 91.1% |
| 4943801 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.68 | 42.0 | 5.00e-01 | 90.3% | 97.5% |
| 4479840 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.68 | 42.0 | 4.96e-01 | 88.7% | 97.5% |
| 3907976 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.67 | 44.0 | 5.00e-01 | 95.2% | 93.3% |
| 3705738 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.61 | 49.0 | 5.01e-01 | 96.8% | 90.0% |
| 4260211 | 4967.1.1.6 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 | 0.56 | 35.0 | 2.74e-01 | 80.6% | 30.2% |
| 3971169 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.53 | 31.0 | 2.59e-01 | 71.0% | 27.5% |