←Back to structures
IMGVR_UViG_3300031987_000009-3300031987-Ga0326338_10002916
Arc-VirIMGVR_UViG_3300031987_000009-3300031987-Ga0326338_10002916
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-103
Domain cluster:
rep: IMGVR_UViG_3300050021_000629-3300050021-Ga0494719_017190_1185_1547__D36-114
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 38.0 | 3.94e-01 | 88.0% | 68.6% |
| 1q16B01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 39.0 | 3.33e-01 | 82.6% | 74.7% |
| 2i10B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 38.0 | 3.42e-01 | 78.3% | 58.4% |
| 4uw9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 34.0 | 3.52e-01 | 83.7% | 74.7% |
| 1c20A00 | 1.10.150.60 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › ARID DNA-binding domain | 0.50 | 43.0 | 3.94e-01 | 100.0% | 80.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3639187 | 212.1.1.34 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFL1 | 0.57 | 46.0 | 3.49e-01 | 92.4% | 92.2% |
| 3520362 | 109.12.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › MAS20 | 0.54 | 35.0 | 3.48e-01 | 96.7% | 63.2% |
| 3524498 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.53 | 38.0 | 3.61e-01 | 79.3% | 63.6% |
| 3882062 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.51 | 37.0 | 3.58e-01 | 98.9% | 66.7% |
| 4129689 | 101.1.1.22 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PapB | 0.51 | 28.0 | 3.07e-01 | 89.1% | 63.3% |