Back to structures

IMGVR_UViG_3300031987_000009-3300031987-Ga0326338_10002916

Arc-Vir

IMGVR_UViG_3300031987_000009-3300031987-Ga0326338_10002916

Quality

78.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-103
PDB
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5koxA02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 38.0 3.94e-01 88.0% 68.6%
1q16B01 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 3.33e-01 82.6% 74.7%
2i10B02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 38.0 3.42e-01 78.3% 58.4%
4uw9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 34.0 3.52e-01 83.7% 74.7%
1c20A00 1.10.150.60 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › ARID DNA-binding domain 0.50 43.0 3.94e-01 100.0% 80.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3639187 212.1.1.34 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFL1 0.57 46.0 3.49e-01 92.4% 92.2%
3520362 109.12.1.1 alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › MAS20 0.54 35.0 3.48e-01 96.7% 63.2%
3524498 101.1.1.53 alpha arrays › HTH › HTH › Three-helical HTH › BEN 0.53 38.0 3.61e-01 79.3% 63.6%
3882062 101.1.1.53 alpha arrays › HTH › HTH › Three-helical HTH › BEN 0.51 37.0 3.58e-01 98.9% 66.7%
4129689 101.1.1.22 alpha arrays › HTH › HTH › Three-helical HTH › PapB 0.51 28.0 3.07e-01 89.1% 63.3%