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IMGVR_UViG_3300031987_000009-3300031987-Ga0326338_10002953
Arc-VirIMGVR_UViG_3300031987_000009-3300031987-Ga0326338_10002953
Identity
- Kingdom:
- archaea
Quality
66.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-73
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cjsA00 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.66 | 39.0 | 4.32e-01 | 84.7% | 74.1% |
| 2yx1A01 | 3.30.70.2580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 35.0 | 3.66e-01 | 76.4% | 63.6% |
| 1bdsA00 | 2.20.20.10 | Mainly Beta › Single Sheet › Anthopleurin-A › Anthopleurin-A | 0.59 | 29.0 | 3.47e-01 | 73.6% | 72.1% |
| 5wt3A01 | 3.30.70.2580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 33.0 | 3.45e-01 | 76.4% | 63.1% |
| 2j0wA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 42.0 | 4.15e-01 | 84.7% | 76.0% |
| 2yvsA02 | 3.30.70.2560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 35.0 | 3.71e-01 | 83.3% | 74.6% |
| 6lxgA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 38.0 | 3.83e-01 | 81.9% | 72.6% |
| 3l09A03 | 3.30.70.2670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 30.0 | 3.51e-01 | 87.5% | 83.0% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 36.0 | 3.62e-01 | 86.1% | 68.0% |
| 2kwaA00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.52 | 42.0 | 3.78e-01 | 88.9% | 74.3% |
| 2kskA00 | 3.30.30.10 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like | 0.52 | 33.0 | 3.38e-01 | 77.8% | 66.2% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 38.0 | 3.50e-01 | 81.9% | 59.6% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.51 | 41.0 | 3.58e-01 | 88.9% | 74.3% |
| 4nzrM03 | 3.30.110.180 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › | 0.50 | 44.0 | 3.74e-01 | 100.0% | 65.0% |
| 1ep5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 39.0 | 3.72e-01 | 100.0% | 72.1% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4958791 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 38.0 | 4.07e-01 | 87.5% | 73.3% |
| 5043257 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.59 | 34.0 | 3.61e-01 | 75.0% | 63.1% |
| 5025171 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.59 | 35.0 | 3.81e-01 | 81.9% | 71.7% |
| 4958064 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.58 | 36.0 | 3.79e-01 | 87.5% | 67.7% |
| 3799886 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.57 | 40.0 | 4.13e-01 | 84.7% | 77.1% |
| 5042680 | 304.24.1.5 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N | 0.56 | 34.0 | 3.64e-01 | 81.9% | 71.7% |
| 3164326 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 39.0 | 3.90e-01 | 81.9% | 71.2% |
| 5037944 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.56 | 37.0 | 3.91e-01 | 88.9% | 76.9% |
| 5066439 | 304.3.1.14 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › DrrA1-3_C | 0.55 | 37.0 | 3.87e-01 | 88.9% | 75.4% |
| None | — | 0.55 | 33.0 | 2.45e-01 | 81.9% | 21.5% | |
| 4940220 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.55 | 35.0 | 3.79e-01 | 88.9% | 78.3% |
| 5047912 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.54 | 36.0 | 3.81e-01 | 88.9% | 76.9% |
| 5018894 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.54 | 37.0 | 3.87e-01 | 88.9% | 78.5% |
| 5025039 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.54 | 30.0 | 3.26e-01 | 81.9% | 63.3% |
| 3818621 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.54 | 43.0 | 2.95e-01 | 94.4% | 49.7% |
| 4958616 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.53 | 39.0 | 3.93e-01 | 91.7% | 76.0% |
| 4102298 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.52 | 32.0 | 3.25e-01 | 81.9% | 60.0% |
| 3242772 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.51 | 33.0 | 3.58e-01 | 100.0% | 81.7% |
| 4014642 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.50 | 34.0 | 3.20e-01 | 100.0% | 56.7% |