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IMGVR_UViG_3300031992_000232-3300031992-Ga0310694_1000082059
Arc-VirIMGVR_UViG_3300031992_000232-3300031992-Ga0310694_1000082059
Identity
- Kingdom:
- archaea
Quality
69.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-82
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5t3wA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.65 | 48.0 | 3.64e-01 | 83.0% | 48.9% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 48.0 | 3.65e-01 | 83.0% | 50.0% |
| 5grqA00 | 1.10.8.810 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Daxx helical bundle domain | 0.63 | 43.0 | 3.63e-01 | 71.7% | 56.7% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 50.0 | 4.13e-01 | 100.0% | 69.6% |
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.59 | 46.0 | 4.34e-01 | 98.1% | 73.6% |
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.56 | 38.0 | 3.67e-01 | 71.7% | 65.6% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.53 | 43.0 | 3.33e-01 | 88.7% | 57.3% |
| 3t5qG01 | 1.10.150.550 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Arenavirus nucleocapsid protein, head domain | 0.50 | 43.0 | 3.53e-01 | 100.0% | 58.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3672736 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.77 | 53.0 | 3.63e-01 | 71.7% | 22.3% |
| None | — | 0.76 | 52.0 | 3.61e-01 | 71.7% | 22.9% | |
| 3036753 | 397.7.1.0 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 | 0.67 | 51.0 | 5.03e-01 | 83.0% | 82.1% |
| 3829878 | 3938.1.1.3 ↗ | alpha arrays › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain › PF26252 | 0.66 | 48.0 | 3.16e-01 | 81.1% | 17.6% |
| 3264687 | 6067.1.1.1 ↗ | alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › SGTA_dimer | 0.65 | 47.0 | 4.45e-01 | 77.4% | 67.7% |
| 3440951 | 387.1.1.52 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › GASA | 0.64 | 46.0 | 4.73e-01 | 90.6% | 86.0% |
| 3472715 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 55.0 | 3.75e-01 | 98.1% | 31.1% |
| 3954937 | 103.2.1.1 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN | 0.62 | 45.0 | 4.03e-01 | 81.1% | 57.5% |
| 4255543 | 7061.1.1.1 ↗ | few secondary structure elements › VWF C8-3 module › VWF C8-3 module › VWF C8-3 module › C8 | 0.61 | 52.0 | 4.52e-01 | 100.0% | 63.5% |
| 3330460 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.58 | 48.0 | 4.55e-01 | 96.2% | 95.4% |
| 3685640 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.58 | 47.0 | 4.14e-01 | 96.2% | 75.3% |
| 3740646 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.57 | 46.0 | 4.15e-01 | 96.2% | 77.5% |
| 4533356 | 1128.1.1.2 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 | 0.57 | 47.0 | 4.17e-01 | 96.2% | 80.0% |
| 4188114 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.56 | 45.0 | 4.08e-01 | 96.2% | 78.8% |
| 4466618 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.55 | 45.0 | 3.97e-01 | 96.2% | 75.3% |
| 4342483 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.55 | 46.0 | 4.02e-01 | 100.0% | 70.0% |
| 3392896 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.55 | 45.0 | 3.97e-01 | 98.1% | 74.1% |
| 3831122 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 46.0 | 4.40e-01 | 100.0% | 83.1% |
| 3538243 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.53 | 44.0 | 3.99e-01 | 100.0% | 81.2% |
| 3267527 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.53 | 43.0 | 3.97e-01 | 96.2% | 84.0% |
| 3420431 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.51 | 43.0 | 3.72e-01 | 96.2% | 63.5% |