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IMGVR_UViG_3300031992_000232-3300031992-Ga0310694_100008206

Arc-Vir

IMGVR_UViG_3300031992_000232-3300031992-Ga0310694_100008206

Identity

Kingdom:
archaea

Quality

82.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-180
PDB
Domain cluster: rep: IMGVR_UViG_3300001520_000261-3300001520-rank44_10346183__D3-66_101-183
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 37.0 4.60e-01 92.5% 98.7%
4qmgC01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 39.0 3.67e-01 92.5% 57.2%
4z9cB00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 42.0 4.50e-01 96.3% 91.3%
6u8yK01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.54 36.0 3.46e-01 77.6% 59.1%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 35.0 4.19e-01 94.8% 98.9%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 29.0 3.20e-01 95.5% 66.1%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 31.0 3.27e-01 78.4% 65.0%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 35.0 4.00e-01 96.3% 96.0%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 38.0 4.04e-01 87.3% 91.4%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 22.0 2.84e-01 100.0% 71.0%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 38.0 3.92e-01 98.5% 84.7%
4p2iA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 40.0 4.22e-01 88.1% 97.4%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
377 2.1.1.90 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › ssDBP 0.63 37.0 4.60e-01 92.5% 98.7%
4593266 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.61 30.0 3.79e-01 88.1% 80.0%
4602887 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 34.0 4.32e-01 95.5% 98.6%
3947988 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 39.0 4.03e-01 96.3% 69.6%
3287532 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 38.0 4.24e-01 97.0% 87.0%
4935307 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 26.0 3.26e-01 100.0% 67.5%
4330094 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.58 31.0 3.61e-01 88.8% 73.3%
168817 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 37.0 4.27e-01 98.5% 90.8%
5082512 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 41.0 4.47e-01 100.0% 90.9%
3838288 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 38.0 4.02e-01 100.0% 79.1%
4661118 218.1.1.2 ↗ a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.56 37.0 3.83e-01 90.3% 71.2%
5076766 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.56 36.0 4.16e-01 81.3% 94.4%
3925865 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.56 35.0 3.65e-01 88.8% 68.3%
4562544 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 39.0 4.12e-01 98.5% 83.5%
4937101 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 39.0 4.12e-01 100.0% 83.3%
3212189 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.54 34.0 3.66e-01 89.6% 72.2%
4997227 2.1.1.111 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.54 38.0 4.02e-01 100.0% 80.0%
4842604 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.54 32.0 3.69e-01 75.4% 81.2%
3233988 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.53 35.0 3.75e-01 99.3% 77.4%
3743261 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 40.0 4.26e-01 100.0% 90.8%
5070134 5.1.4.43 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.51 37.0 2.74e-01 74.6% 72.0%
4954093 2.1.1.76 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.50 38.0 3.99e-01 100.0% 86.4%