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IMGVR_UViG_3300031993_000038-3300031993-Ga0310696_100002251
Arc-VirIMGVR_UViG_3300031993_000038-3300031993-Ga0310696_100002251
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-136
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03237.22 best | Terminase_6N | 32.4 | 1.00e-07 | 46.6% | 22.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o0jA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.93 | 85.0 | 6.35e-01 | 100.0% | 44.1% |
| 1hi8A02 | 1.10.490.60 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phage p2 RNA dependent RNA polymerase domain | 0.58 | 41.0 | 3.88e-01 | 72.9% | 80.6% |
| 2qneA01 | 3.20.20.480 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Trimethylamine methyltransferase-like | 0.54 | 40.0 | 2.76e-01 | 80.5% | 63.6% |
| 1uwdA00 | 3.30.300.130 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Fe-S cluster assembly (FSCA) | 0.51 | 31.0 | 3.31e-01 | 70.3% | 68.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3967314 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.80 | 52.0 | 4.63e-01 | 89.0% | 47.3% |
| 3463534 | 101.1.10.57 ↗ | alpha arrays › HTH › HTH › Cyclin-like › AAA_34 | 0.75 | 57.0 | 6.19e-01 | 85.6% | 94.0% |
| 4014913 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.56 | 27.0 | 2.57e-01 | 100.0% | 37.9% |
| 3614193 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 40.0 | 3.02e-01 | 78.8% | 59.4% |
| 4268279 | 3227.1.1.1 ↗ | alpha complex topology › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › phosphorylation-coupled saccharide transporter ChbC › PTS_EIIC | 0.52 | 36.0 | 2.51e-01 | 72.9% | 44.0% |