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IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483
Arc-VirIMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-86
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.93 | 80.0 | 8.47e-01 | 97.6% | 100.0% |
| 6asoH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 52.0 | 5.30e-01 | 81.2% | 62.7% |
| 4m7dA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 56.0 | 6.41e-01 | 84.7% | 87.7% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 44.0 | 5.76e-01 | 82.4% | 91.8% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 54.0 | 6.02e-01 | 87.1% | 83.8% |
| 4m78N00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 51.0 | 5.62e-01 | 85.9% | 77.5% |
| 4f7uG00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 55.0 | 6.14e-01 | 87.1% | 88.2% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 52.0 | 5.66e-01 | 83.5% | 78.9% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 52.0 | 5.59e-01 | 88.2% | 77.0% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 54.0 | 5.78e-01 | 85.9% | 82.2% |
| 4emhA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 52.0 | 6.07e-01 | 83.5% | 98.3% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 53.0 | 4.93e-01 | 84.7% | 58.1% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 55.0 | 5.79e-01 | 88.2% | 84.0% |
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 52.0 | 5.29e-01 | 85.9% | 73.2% |
| 4c92A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 60.0 | 5.11e-01 | 91.8% | 54.6% |
| 4c92F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 55.0 | 5.75e-01 | 87.1% | 84.4% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 47.0 | 4.82e-01 | 84.7% | 66.3% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 50.0 | 4.76e-01 | 85.9% | 60.0% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 52.0 | 5.44e-01 | 84.7% | 83.5% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.68 | 43.0 | 4.04e-01 | 92.9% | 52.5% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.66 | 48.0 | 4.71e-01 | 90.6% | 69.9% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 52.0 | 5.37e-01 | 95.3% | 90.1% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.63 | 45.0 | 4.69e-01 | 100.0% | 83.1% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.61 | 41.0 | 3.16e-01 | 81.2% | 30.9% |
| 4c0fC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.61 | 41.0 | 3.76e-01 | 81.2% | 52.7% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 47.0 | 4.92e-01 | 85.9% | 87.5% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 45.0 | 4.53e-01 | 97.6% | 83.7% |
| 1h6qA00 | 2.170.150.10 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A | 0.54 | 43.0 | 3.43e-01 | 84.7% | 100.0% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.53 | 37.0 | 3.60e-01 | 81.2% | 63.9% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 44.0 | 3.77e-01 | 100.0% | 99.3% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.67e-01 | 88.2% | 68.1% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4478186 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.92 | 47.0 | 6.59e-01 | 82.4% | 97.8% |
| 4813032 | 4.1.1.328 ↗ | beta barrels › SH3 › SH3 › SH3 › Sm_like | 0.90 | 78.0 | 8.07e-01 | 100.0% | 97.5% |
| 4890477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.90 | 53.0 | 6.82e-01 | 71.8% | 100.0% |
| 3936053 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.82 | 52.0 | 5.72e-01 | 84.7% | 78.6% |
| 3270749 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.81 | 61.0 | 6.34e-01 | 91.8% | 83.7% |
| 3999729 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.76 | 54.0 | 5.32e-01 | 85.9% | 69.7% |
| 4014972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 60.0 | 5.88e-01 | 92.9% | 81.1% |
| 3189264 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.74 | 60.0 | 5.66e-01 | 92.9% | 73.0% |
| 4030048 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.74 | 60.0 | 5.54e-01 | 92.9% | 69.5% |
| 3725354 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.72 | 62.0 | 5.09e-01 | 92.9% | 61.3% |
| 4976092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 48.0 | 4.78e-01 | 87.1% | 65.6% |
| 4024727 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 53.0 | 4.89e-01 | 87.1% | 62.5% |
| 4340758 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 48.0 | 5.33e-01 | 83.5% | 85.7% |
| 3593085 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 61.0 | 5.72e-01 | 94.1% | 81.6% |
| 3168781 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.69 | 54.0 | 5.00e-01 | 88.2% | 66.7% |
| 3482844 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 56.0 | 5.64e-01 | 95.3% | 87.1% |
| 3197566 | 4.1.1.89 ↗ | beta barrels › SH3 › SH3 › SH3 › SM-ATX | 0.67 | 55.0 | 5.21e-01 | 87.1% | 80.0% |
| 3455165 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.67 | 53.0 | 5.16e-01 | 84.7% | 75.8% |
| 4073433 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.67 | 49.0 | 5.09e-01 | 91.8% | 81.2% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 47.0 | 4.27e-01 | 87.1% | 56.4% |
| 3187241 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.66 | 54.0 | 4.94e-01 | 87.1% | 77.3% |
| 3788817 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.65 | 52.0 | 5.24e-01 | 84.7% | 84.7% |
| 4931202 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 50.0 | 4.97e-01 | 84.7% | 97.8% |
| 3233110 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.63 | 51.0 | 4.89e-01 | 85.9% | 74.5% |
| 3555586 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.63 | 52.0 | 4.98e-01 | 87.1% | 77.9% |
| 5003044 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.62 | 53.0 | 4.04e-01 | 95.3% | 65.5% |
| 1108449 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.61 | 41.0 | 3.16e-01 | 81.2% | 30.9% |
| 4017204 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.61 | 55.0 | 5.16e-01 | 95.3% | 85.0% |
| 3702167 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 52.0 | 4.69e-01 | 91.8% | 71.3% |
| 4149046 | 243.3.1.60 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5385 | 0.59 | 42.0 | 4.19e-01 | 75.3% | 72.2% |
| 5050188 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 47.0 | 4.65e-01 | 88.2% | 81.1% |
| 4960173 | 9.16.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 | 0.58 | 44.0 | 3.93e-01 | 81.2% | 68.3% |
| 3502311 | 3523.1.1.2 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptD_N | 0.57 | 39.0 | 3.64e-01 | 75.3% | 58.3% |
| 3399755 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.56 | 38.0 | 4.04e-01 | 100.0% | 80.0% |
| 3859965 | 4.1.1.107 ↗ | beta barrels › SH3 › SH3 › SH3 › XRN1_D1 | 0.55 | 42.0 | 3.28e-01 | 82.4% | 66.3% |
| 3475429 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 4.54e-01 | 81.2% | 98.6% |
| 3266626 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.54 | 38.0 | 3.62e-01 | 77.6% | 62.6% |
| 3268410 | 5.1.3.135 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 | 0.53 | 47.0 | 3.11e-01 | 100.0% | 49.7% |
| 4942867 | 11.4.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) | 0.53 | 38.0 | 3.21e-01 | 76.5% | 81.3% |
| 3037891 | 1.1.7.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Astro_capsid_p | 0.53 | 44.0 | 3.35e-01 | 92.9% | 77.3% |
| 3177469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 4.00e-01 | 88.2% | 91.4% |
| 224086 | 9.18.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.52 | 44.0 | 3.77e-01 | 100.0% | 99.3% |
| 3253267 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 37.0 | 3.74e-01 | 82.4% | 75.3% |
| 3884131 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 40.0 | 3.71e-01 | 100.0% | 64.3% |