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IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038489
Arc-VirIMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038489
Identity
- Kingdom:
- archaea
Quality
87.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-100
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jpdX01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 38.0 | 3.81e-01 | 70.4% | 58.6% |
| 5gneA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 43.0 | 3.23e-01 | 86.7% | 99.6% |
| 1ow1A00 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.55 | 44.0 | 3.67e-01 | 85.7% | 79.0% |
| 3devA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.53 | 41.0 | 3.91e-01 | 93.9% | 70.7% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 35.0 | 3.01e-01 | 84.7% | 40.0% |
| 6hmjA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 41.0 | 4.01e-01 | 84.7% | 81.0% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.52 | 31.0 | 3.31e-01 | 83.7% | 67.5% |
| 3rioA01 | 2.30.24.10 | Mainly Beta › Roll › Transcription Regulation, Sacy; Chain A › CAT RNA-binding domain | 0.52 | 35.0 | 4.02e-01 | 90.8% | 100.0% |
| 3k3dA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 40.0 | 3.67e-01 | 86.7% | 64.3% |
| 2bcqA03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 39.0 | 3.64e-01 | 81.6% | 96.7% |
| 4ufcA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.51 | 43.0 | 3.05e-01 | 96.9% | 50.3% |
| 5wm1A05 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.50 | 41.0 | 3.96e-01 | 93.9% | 85.5% |
| 7c51A01 | 3.30.70.2970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 | 0.50 | 36.0 | 3.54e-01 | 84.7% | 68.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944957 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.68 | 60.0 | 5.17e-01 | 100.0% | 62.3% |
| 4226880 | 223.1.1.69 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › VWA_N | 0.62 | 49.0 | 3.71e-01 | 85.7% | 92.9% |
| 4182020 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.61 | 51.0 | 4.15e-01 | 95.9% | 47.4% |
| 3755260 | 223.1.1.102 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › VWA_N, PF30670 | 0.61 | 49.0 | 3.37e-01 | 85.7% | 56.6% |
| 3593279 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 46.0 | 3.32e-01 | 85.7% | 93.0% |
| 3279780 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.57 | 45.0 | 3.62e-01 | 88.8% | 41.4% |
| 4988329 | 223.1.1.20 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF3365 | 0.56 | 45.0 | 3.62e-01 | 85.7% | 65.8% |
| 3391162 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 45.0 | 3.41e-01 | 90.8% | 60.8% |
| 3599063 | 210.1.1.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits | 0.56 | 41.0 | 3.03e-01 | 79.6% | 56.8% |
| 4942338 | 815.1.1.1 ↗ | a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 › MC1 | 0.55 | 38.0 | 3.83e-01 | 78.6% | 70.0% |
| 3483890 | 223.2.1.25 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 | 0.55 | 48.0 | 4.11e-01 | 96.9% | 75.0% |
| 3495172 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 47.0 | 4.07e-01 | 100.0% | 70.3% |
| 3201142 | 223.2.1.25 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 | 0.54 | 41.0 | 3.96e-01 | 82.7% | 70.4% |
| 3641389 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 43.0 | 2.83e-01 | 85.7% | 42.9% |
| 3601196 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.52 | 42.0 | 3.56e-01 | 85.7% | 53.1% |
| 3729158 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.52 | 40.0 | 3.18e-01 | 93.9% | 39.5% |
| 5048986 | 2008.1.1.155 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › CoiA_nuc | 0.51 | 40.0 | 3.29e-01 | 85.7% | 51.6% |
| 3271375 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 37.0 | 3.05e-01 | 75.5% | 92.8% |
| 4992091 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.51 | 41.0 | 2.69e-01 | 90.8% | 20.0% |
| 5551 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.50 | 35.0 | 3.19e-01 | 71.4% | 60.5% |
| 3263715 | 59.1.2.2 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › Ydr279_N | 0.50 | 34.0 | 3.76e-01 | 84.7% | 87.5% |