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IMGVR_UViG_3300032007_003862-3300032007-Ga0310695_100106276

Arc-Vir

IMGVR_UViG_3300032007_003862-3300032007-Ga0310695_100106276

Quality

76.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-137
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 44.0 4.44e-01 75.2% 56.6%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 42.0 4.88e-01 74.4% 75.8%
3dp7B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 39.0 4.56e-01 70.5% 74.2%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 39.0 5.06e-01 79.8% 100.0%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 39.0 5.04e-01 71.3% 98.6%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 41.0 5.20e-01 72.9% 98.7%
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.69 53.0 4.68e-01 79.1% 73.3%
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 39.0 4.82e-01 75.2% 88.9%
2mc3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 5.46e-01 84.5% 93.2%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 37.0 4.53e-01 71.3% 81.7%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 39.0 4.99e-01 70.5% 98.6%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 39.0 4.90e-01 71.3% 97.3%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 41.0 4.77e-01 77.5% 85.4%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 40.0 4.73e-01 72.9% 84.3%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 40.0 4.67e-01 76.7% 83.3%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 39.0 4.73e-01 76.0% 91.5%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 40.0 4.97e-01 71.3% 100.0%
3b02A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 43.0 5.10e-01 84.5% 100.0%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 43.0 4.90e-01 86.0% 88.8%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.65 50.0 4.64e-01 79.1% 69.9%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.65 50.0 4.59e-01 79.8% 67.5%
3dkwG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 40.0 4.86e-01 71.3% 97.5%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 42.0 5.02e-01 74.4% 100.0%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 40.0 4.78e-01 71.3% 93.0%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 38.0 4.53e-01 76.7% 88.2%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 47.0 4.87e-01 76.0% 97.5%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 43.0 4.82e-01 79.1% 87.1%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 41.0 4.21e-01 76.0% 68.5%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 38.0 4.37e-01 79.1% 88.8%
1x1aA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 39.0 3.53e-01 76.0% 48.6%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.22e-01 76.7% 73.6%
4bqnA02 1.10.10.2490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 45.0 4.58e-01 85.3% 100.0%
2ccqA00 1.20.58.2190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 36.0 3.96e-01 76.0% 83.8%
3hn2A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.54 44.0 4.46e-01 86.8% 92.2%
2lxiA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 31.0 3.54e-01 87.6% 78.0%
1ndbA02 3.30.559.70 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Choline/Carnitine o-acyltransferase, domain 2 0.53 43.0 3.29e-01 87.6% 79.3%
3kp7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 4.04e-01 98.4% 75.0%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 4.35e-01 100.0% 83.1%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.76e-01 77.5% 84.8%
3i83A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.52 42.0 4.17e-01 86.8% 85.7%
1oltA02 1.10.10.920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 32.0 3.83e-01 71.3% 98.8%
2k3nA00 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.51 43.0 3.99e-01 91.5% 76.2%
2j9wB00 1.20.120.1130 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain 0.50 32.0 3.49e-01 70.5% 79.8%
7sf8A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.50 39.0 3.30e-01 84.5% 67.6%
2q9rA01 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.50 41.0 3.61e-01 89.9% 93.8%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081553 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 75.0 6.86e-01 97.7% 98.2%
5018590 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 69.0 7.29e-01 93.8% 100.0%
4945179 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 76.0 7.28e-01 100.0% 91.0%
5025462 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 75.0 7.39e-01 99.2% 98.5%
5019931 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 73.0 6.96e-01 100.0% 85.3%
5002434 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 44.0 5.66e-01 72.1% 96.0%
4956464 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 46.0 5.56e-01 70.5% 89.4%
4972049 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 43.0 4.79e-01 73.6% 68.6%
4977854 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 43.0 5.22e-01 73.6% 84.7%
5043806 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 43.0 5.02e-01 73.6% 78.9%
4987371 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 64.0 6.78e-01 90.7% 100.0%
4995114 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 46.0 5.34e-01 73.6% 83.2%
3956986 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 60.0 6.07e-01 83.7% 96.9%
4954458 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 41.0 5.19e-01 71.3% 90.7%
4968451 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 69.0 6.96e-01 99.2% 98.5%
4933063 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.75 45.0 5.43e-01 71.3% 90.6%
4944093 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 43.0 5.07e-01 73.6% 81.1%
3984604 7558.1.1.10 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › GPAT_C 0.75 54.0 6.12e-01 81.4% 100.0%
5013212 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 40.0 5.23e-01 71.3% 95.7%
5048731 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.75 42.0 4.83e-01 75.2% 74.7%
4957190 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 40.0 4.92e-01 71.3% 83.7%
5015794 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 43.0 5.32e-01 73.6% 92.5%
4985673 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 50.0 5.78e-01 82.2% 97.8%
5039734 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 37.0 5.05e-01 75.2% 96.9%
4953298 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.74 43.0 4.30e-01 76.7% 56.9%
5077428 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 46.0 5.37e-01 73.6% 88.9%
3621304 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 47.0 5.58e-01 79.1% 96.5%
5008624 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 39.0 4.95e-01 76.0% 88.0%
5047360 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 41.0 4.56e-01 75.2% 67.6%
4979152 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.73 42.0 4.85e-01 76.0% 76.8%
4991609 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.73 47.0 5.49e-01 73.6% 92.2%
5068813 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 45.0 5.09e-01 73.6% 80.0%
5002415 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.73 43.0 4.64e-01 76.7% 68.2%
5070038 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 47.0 5.29e-01 91.5% 85.0%
4952731 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.72 43.0 4.80e-01 77.5% 75.0%
4231800 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 46.0 5.34e-01 73.6% 88.4%
4953300 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.72 42.0 4.61e-01 76.0% 70.5%
3282555 101.1.2.643 alpha arrays › HTH › HTH › winged helix domain › AAA_assoc_C 0.71 39.0 4.59e-01 72.9% 76.7%
5046069 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 42.0 5.02e-01 72.9% 88.2%
3587937 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.70 53.0 4.47e-01 79.1% 63.3%
4990500 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 48.0 5.53e-01 79.1% 100.0%
5078903 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.70 41.0 4.25e-01 75.2% 61.7%
5031879 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 41.0 4.64e-01 76.7% 77.9%
4961645 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.69 42.0 4.96e-01 77.5% 86.7%
5004401 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.69 41.0 4.76e-01 76.7% 83.3%
5071075 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.69 39.0 4.64e-01 73.6% 83.5%
4149682 101.1.2.787 alpha arrays › HTH › HTH › winged helix domain › PF27146, PF27262 0.68 48.0 4.39e-01 72.9% 58.8%
5075222 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 40.0 4.87e-01 72.9% 93.8%
4283969 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.68 52.0 4.48e-01 79.8% 66.2%
5005261 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.66 40.0 4.67e-01 77.5% 85.6%
4931105 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 37.0 3.82e-01 73.6% 56.0%
4264627 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.66 51.0 4.50e-01 79.8% 61.1%
3691906 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 46.0 5.16e-01 72.1% 100.0%
3931554 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 5.03e-01 97.7% 74.0%
4991639 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 39.0 4.78e-01 85.3% 97.5%
4232234 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.64 56.0 4.92e-01 95.3% 92.1%
3282607 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 42.0 4.28e-01 76.7% 68.0%
3690974 101.1.2.359 alpha arrays › HTH › HTH › winged helix domain › GPIID_WHD 0.62 47.0 4.97e-01 95.3% 88.7%
3507067 197.1.1.1 alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M 0.61 41.0 4.40e-01 75.2% 80.0%
4933514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 4.64e-01 82.9% 94.3%
3279300 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 50.0 4.63e-01 93.0% 71.2%
3733386 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 51.0 4.47e-01 94.6% 62.6%
5035979 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 48.0 4.95e-01 99.2% 91.7%
4011107 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 4.73e-01 98.4% 78.0%
4181610 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 32.0 3.43e-01 76.0% 59.1%
5030996 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 5.04e-01 93.0% 97.5%
3928033 101.1.2.303 alpha arrays › HTH › HTH › winged helix domain › RPC5 0.57 42.0 4.60e-01 83.7% 94.3%
3244835 197.1.1.0 alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like 0.57 40.0 4.02e-01 76.0% 70.4%
4933710 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 47.0 3.34e-01 89.9% 37.0%
3808197 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.56 46.0 4.52e-01 86.8% 86.4%
4993180 183.1.1.1 alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C 0.54 43.0 4.33e-01 82.9% 93.8%
3249793 5001.1.1.80 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Dicty_CAR 0.53 42.0 3.29e-01 84.5% 60.7%
3205121 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.52 31.0 3.76e-01 99.2% 95.0%
D2 high residues 148-293
PDB