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IMGVR_UViG_3300032036_000354-3300032036-Ga0326509_10129762
Arc-VirIMGVR_UViG_3300032036_000354-3300032036-Ga0326509_10129762
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 83-105_202-245
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07068.18 best | Gp23 | 40.2 | 4.00e-10 | 67.2% | 11.5% |
D2
medium
residues 106-145_183-201
D3
medium
residues 246-305
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nekA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.57 | 37.0 | 3.81e-01 | 71.7% | 71.4% |
| 2ka6B00 | 6.10.250.3310 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › signal transducer and activator of transcription 1 | 0.50 | 23.0 | 2.63e-01 | 76.7% | 51.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4354750 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.59 | 41.0 | 3.85e-01 | 95.0% | 58.7% |
| 141918 | 101.1.2.49 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C | 0.55 | 44.0 | 3.12e-01 | 85.0% | 72.9% |
D4
medium
residues 306-381_416-436
Domain cluster:
rep: DQ490907.1__ABF57697.1__X__00002__D8-79_135-149
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07068.18 best | Gp23 | 38.2 | 1.70e-09 | 81.4% | 19.2% |