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IMGVR_UViG_3300032036_000354-3300032036-Ga0326509_10129762

Arc-Vir

IMGVR_UViG_3300032036_000354-3300032036-Ga0326509_10129762

Quality

71.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 83-105_202-245
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07068.18 best Gp23 40.2 4.00e-10 67.2% 11.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3948230 4120.1.1.2 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › DUF1158 0.57 45.0 4.50e-01 88.1% 85.7%
D2 medium residues 106-145_183-201
PDB
D3 medium residues 246-305
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nekA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.57 37.0 3.81e-01 71.7% 71.4%
2ka6B00 6.10.250.3310 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › signal transducer and activator of transcription 1 0.50 23.0 2.63e-01 76.7% 51.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4354750 3121.1.1.3 a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 0.59 41.0 3.85e-01 95.0% 58.7%
141918 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.55 44.0 3.12e-01 85.0% 72.9%
D4 medium residues 306-381_416-436
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07068.18 best Gp23 38.2 1.70e-09 81.4% 19.2%