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IMGVR_UViG_3300032047_003349-3300032047-Ga0315330_100069219
Arc-VirIMGVR_UViG_3300032047_003349-3300032047-Ga0315330_100069219
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-216
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00926.25 best | DHBP_synthase | 110.8 | 8.70e-32 | 100.0% | 75.9% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pvwA00 | 3.90.870.10 | Alpha Beta › Alpha-Beta Complex › DHBP synthase › DHBP synthase | 0.98 | 90.0 | 8.29e-01 | 100.0% | 78.1% |
| 1g57A00 | 3.90.870.10 | Alpha Beta › Alpha-Beta Complex › DHBP synthase › DHBP synthase | 0.91 | 72.0 | 6.89e-01 | 100.0% | 72.2% |
| 2hg4A02 | 3.30.70.3290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 25.0 | 2.94e-01 | 75.4% | 55.6% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.54 | 22.0 | 3.34e-01 | 74.3% | 87.2% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.52 | 22.0 | 3.13e-01 | 76.0% | 84.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5083078 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.98 | 94.0 | 8.46e-01 | 100.0% | 76.6% |
| 4928295 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.97 | 76.0 | 7.47e-01 | 100.0% | 76.3% |
| 5027278 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.96 | 94.0 | 8.33e-01 | 100.0% | 75.8% |
| 4971832 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.96 | 87.0 | 8.04e-01 | 100.0% | 77.3% |
| 4975786 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.95 | 92.0 | 8.26e-01 | 100.0% | 77.0% |
| 4187753 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.93 | 73.0 | 7.06e-01 | 100.0% | 73.5% |
| 4944412 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.93 | 73.0 | 7.05e-01 | 100.0% | 73.5% |
| 4680908 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.92 | 69.0 | 6.80e-01 | 100.0% | 73.2% |
| 3163803 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.91 | 72.0 | 6.81e-01 | 100.0% | 70.5% |
| 3737588 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.91 | 73.0 | 7.03e-01 | 100.0% | 75.0% |
| 3953794 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.91 | 70.0 | 6.84e-01 | 100.0% | 73.8% |
| 4329567 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.86 | 63.0 | 6.38e-01 | 100.0% | 75.6% |
| 3649067 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.82 | 72.0 | 6.67e-01 | 100.0% | 75.5% |
| 3183668 | 297.1.1.1 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB › DHBP_synthase | 0.76 | 73.0 | 6.57e-01 | 100.0% | 79.0% |
| 4426567 | 297.1.1.0 ↗ | a+b complex topology › YrdC/RibB › YrdC/RibB › YrdC/RibB | 0.74 | 44.0 | 4.76e-01 | 100.0% | 68.4% |