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IMGVR_UViG_3300032073_007043-3300032073-Ga0315315_100124051

Arc-Vir

IMGVR_UViG_3300032073_007043-3300032073-Ga0315315_100124051

Quality

84.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 127-312
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3jx8A00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.77 53.0 4.71e-01 98.4% 51.8%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.72 48.0 5.25e-01 95.2% 79.6%
4oj5C04 2.160.20.130 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.71 51.0 5.13e-01 96.8% 73.5%
5z9tA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.68 63.0 4.58e-01 100.0% 45.2%
1jtaA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.67 62.0 4.95e-01 98.9% 57.1%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 44.0 4.80e-01 93.0% 77.8%
3n6zA01 2.160.20.110 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.67 60.0 5.32e-01 97.3% 71.3%
1dbgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.67 61.0 4.52e-01 100.0% 45.5%
4c2lA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.66 61.0 4.81e-01 100.0% 78.5%
4w8qA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.66 50.0 4.65e-01 91.9% 63.2%
3eqnA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 60.0 4.87e-01 98.9% 68.4%
3lycA00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.64 49.0 4.47e-01 98.4% 60.6%
2yuhA01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.62 43.0 4.51e-01 95.2% 76.2%
2xt2B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.62 48.0 4.74e-01 100.0% 76.3%
1qjvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.61 56.0 4.54e-01 98.4% 63.5%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.61 47.0 5.07e-01 98.9% 93.6%
1gq8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.60 56.0 4.63e-01 100.0% 65.4%
5c1cA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.59 54.0 4.62e-01 98.9% 71.6%
1rwrA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.59 54.0 4.59e-01 98.4% 69.4%
4v02C00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.59 39.0 4.58e-01 100.0% 100.0%
4kh3A00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.58 47.0 3.39e-01 100.0% 31.7%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4012012 207.4.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like 0.86 46.0 6.31e-01 87.1% 98.0%
3254891 207.6.1.8 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Nucleoporin_FG 0.83 47.0 5.48e-01 95.2% 77.0%
4030372 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.77 47.0 5.42e-01 95.7% 82.2%
3844962 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.75 47.0 5.75e-01 94.6% 97.5%
3901107 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.75 38.0 4.69e-01 96.2% 75.8%
3711105 208.7.1.6 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Nucleoporin_FG 0.74 34.0 3.81e-01 95.2% 54.0%
4028784 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.74 42.0 5.41e-01 94.6% 97.1%
4406918 207.6.1.16 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP 0.71 45.0 5.34e-01 97.3% 90.8%
3546698 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.71 53.0 5.66e-01 97.3% 88.1%
4971789 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.71 43.0 5.13e-01 96.2% 86.9%
4026564 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.71 46.0 4.51e-01 98.4% 61.5%
3758283 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.70 53.0 5.50e-01 98.9% 83.4%
4028145 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.69 47.0 5.11e-01 96.8% 82.5%
3744798 208.1.1.43 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › DUF1720 0.68 40.0 4.39e-01 96.2% 70.7%
4949774 208.7.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein 0.68 42.0 4.77e-01 99.5% 79.3%
3273802 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.68 53.0 4.94e-01 98.9% 66.5%
3621708 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.68 48.0 4.97e-01 100.0% 75.8%
3610447 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.68 62.0 4.20e-01 98.4% 36.0%
3709143 207.2.1.50 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DGF-1_beta-sheet 0.68 63.0 4.88e-01 99.5% 57.4%
4942054 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.67 63.0 5.13e-01 100.0% 70.0%
3235440 207.6.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › Epiglycanin_TR 0.67 62.0 4.67e-01 100.0% 82.3%
3787858 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.65 39.0 4.29e-01 98.9% 72.7%
4995410 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.63 53.0 4.42e-01 100.0% 51.1%
5058080 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.63 52.0 4.12e-01 99.5% 42.0%
3213256 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.62 59.0 4.43e-01 100.0% 45.1%
3607554 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.61 56.0 4.35e-01 100.0% 66.1%
4333063 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.61 56.0 4.64e-01 100.0% 72.6%
4983794 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.59 54.0 4.21e-01 100.0% 55.1%
4561172 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.59 34.0 3.30e-01 99.5% 50.0%
5023405 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.58 47.0 4.41e-01 100.0% 69.6%
3869345 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.58 54.0 5.04e-01 100.0% 84.9%
3796564 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.58 42.0 4.64e-01 99.5% 89.0%
3612083 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.58 54.0 4.96e-01 99.5% 80.3%
3355383 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.58 52.0 4.54e-01 100.0% 71.0%
3706587 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.57 49.0 4.36e-01 98.9% 65.0%
4307386 207.6.1.16 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP 0.57 42.0 4.22e-01 100.0% 75.7%
3186357 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.57 50.0 4.30e-01 100.0% 60.8%
3855439 207.8.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD 0.56 50.0 4.38e-01 98.4% 75.4%
3666251 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.55 51.0 4.47e-01 98.4% 69.3%
3707216 208.2.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain 0.55 38.0 3.61e-01 100.0% 59.1%
3336085 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.55 48.0 4.68e-01 100.0% 84.2%
3778106 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.53 47.0 3.83e-01 96.2% 52.8%
3766711 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.53 35.0 3.33e-01 100.0% 56.3%
D2 high residues 487-560
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ahdC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 46.0 3.25e-01 82.4% 29.5%
2knaA01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.60 38.0 4.23e-01 75.7% 87.0%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 52.0 5.08e-01 97.3% 96.3%
3sdgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 35.0 4.16e-01 81.1% 100.0%
3qybA03 1.10.472.80 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 0.59 41.0 3.52e-01 74.3% 55.3%
7osfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 43.0 3.19e-01 82.4% 31.6%
1hjzA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.58 50.0 3.76e-01 98.6% 59.4%
7kypE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 43.0 3.20e-01 83.8% 35.5%
1g6hA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 43.0 3.10e-01 85.1% 34.3%
3tuiD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 43.0 3.11e-01 82.4% 30.6%
3vkgA09 1.20.920.30 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.55 46.0 3.82e-01 97.3% 64.6%
2ihyA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 40.0 2.88e-01 82.4% 27.0%
1gaxA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 41.0 2.77e-01 90.5% 91.7%
6ifsB02 1.10.8.100 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain 0.52 37.0 3.79e-01 77.0% 88.7%
3natA01 3.40.50.11250 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF3013 0.52 37.0 3.00e-01 75.7% 68.0%
1bqbA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.51 43.0 3.59e-01 98.6% 60.4%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 36.0 3.90e-01 86.5% 93.1%
1zq9A02 1.10.8.480 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.51 40.0 3.76e-01 90.5% 91.8%
1dcnA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.50 41.0 4.16e-01 100.0% 98.6%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4127906 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.69 49.0 5.44e-01 85.1% 100.0%
4033673 829.1.1.2 a+b duplicates or obligate multimers › NinB › NinB › NinB › HNHc_6 0.67 56.0 5.41e-01 93.2% 90.6%
3604535 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.62 52.0 4.21e-01 94.6% 94.7%
3907048 110.1.1.0 alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.59 44.0 4.30e-01 79.7% 93.8%
2100896 1180.1.1.1 alpha bundles › Flagellar biosynthetic protein FliP periplasmic domain › Flagellar biosynthetic protein FliP periplasmic domain › Flagellar biosynthetic protein FliP periplasmic domain › FliP 0.59 41.0 4.24e-01 77.0% 80.6%
3587033 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.58 43.0 3.03e-01 82.4% 28.7%
3400497 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.56 42.0 2.87e-01 82.4% 24.0%
3712920 3621.1.1.0 alpha arrays › Dipeptidyl-peptidase 2 helical domain › Dipeptidyl-peptidase 2 helical domain › Dipeptidyl-peptidase 2 helical domain 0.56 39.0 3.51e-01 73.0% 77.1%
3716864 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 37.0 3.85e-01 85.1% 78.5%
3973633 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 40.0 2.43e-01 79.7% 12.5%
3238624 2004.1.1.303 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC2_membrane_7 0.54 40.0 2.75e-01 83.8% 23.4%
5053523 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.53 39.0 3.59e-01 81.1% 91.4%
3678178 102.2.1.2 alpha arrays › HhH/H2TH › H2TH › H2TH › Ribosomal_S13 0.53 38.0 3.09e-01 77.0% 44.1%
4566719 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.52 40.0 2.55e-01 83.8% 63.7%
3237353 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.51 42.0 3.89e-01 93.2% 71.0%
5065357 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.51 35.0 3.57e-01 78.4% 73.3%
4933950 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.51 39.0 2.90e-01 87.8% 84.0%
3179526 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.50 37.0 2.54e-01 81.1% 42.7%
D3 medium residues 6-91
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i0oA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.60 47.0 3.31e-01 86.0% 76.0%
1okqA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 45.0 3.61e-01 81.4% 62.9%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.59 48.0 4.21e-01 88.4% 95.3%
1hn0A03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 42.0 2.98e-01 76.7% 81.5%
6n44A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 48.0 4.08e-01 89.5% 73.4%
2jd4A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 43.0 3.50e-01 81.4% 63.1%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 42.0 3.32e-01 80.2% 57.5%
1yrzA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.62e-01 93.0% 78.0%
4azzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.56 52.0 4.12e-01 100.0% 78.8%
5jowA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 50.0 3.80e-01 100.0% 77.0%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 49.0 3.61e-01 100.0% 73.8%
1pz7A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 48.0 3.71e-01 96.5% 63.8%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 47.0 3.69e-01 98.8% 75.4%
4ozxA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.28e-01 97.7% 58.2%
1gv9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.56e-01 100.0% 78.5%
3b5qA00 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.54 46.0 2.94e-01 97.7% 86.2%
5jozB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.54e-01 96.5% 73.4%
1vquB02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.53 41.0 2.94e-01 83.7% 84.0%
3ecqA01 2.60.120.870 Mainly Beta › Sandwich › Jelly Rolls › 0.53 48.0 3.73e-01 100.0% 79.8%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.52 40.0 2.89e-01 83.7% 78.3%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 47.0 3.91e-01 100.0% 75.0%
3mepA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 3.59e-01 100.0% 79.3%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 41.0 3.41e-01 87.2% 55.3%
3ugfB02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.50 41.0 3.32e-01 90.7% 77.4%
1y4wA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.50 41.0 3.39e-01 91.9% 74.1%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928895 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.69 64.0 4.40e-01 100.0% 34.3%
3666734 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.64 45.0 3.91e-01 74.4% 61.5%
3495597 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.62 47.0 3.51e-01 81.4% 54.7%
4024468 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 53.0 3.95e-01 90.7% 81.5%
4029923 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 51.0 3.78e-01 90.7% 80.0%
3511755 10.1.1.1 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.61 46.0 3.65e-01 80.2% 63.3%
3223873 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.61 46.0 3.69e-01 82.6% 66.1%
3901783 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.60 50.0 3.73e-01 93.0% 63.9%
3520868 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 43.0 3.63e-01 75.6% 75.7%
3808930 5.3.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II 0.58 43.0 3.70e-01 77.9% 95.7%
3906657 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.58 45.0 3.42e-01 82.6% 54.0%
3181426 511.1.1.2 beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › PF27034 0.58 40.0 3.42e-01 72.1% 82.1%
3782417 883.1.1.18 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26545 0.57 41.0 3.15e-01 74.4% 87.0%
5057645 9.2.1.0 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.57 39.0 3.60e-01 72.1% 63.5%
3585302 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 49.0 3.83e-01 97.7% 62.6%
3389881 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.56 50.0 3.77e-01 100.0% 59.5%
4023269 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.56 38.0 3.53e-01 72.1% 55.5%
3482450 10.1.1.1 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.55 46.0 3.59e-01 94.2% 59.5%
3990496 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.53 37.0 4.00e-01 72.1% 90.0%
4950432 210.1.1.5 a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › DUF2121 0.52 40.0 3.05e-01 81.4% 61.6%
5076987 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.51 45.0 3.06e-01 97.7% 33.7%
3658278 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.51 42.0 2.80e-01 89.5% 56.4%
3713703 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 37.0 3.33e-01 75.6% 73.0%
3368252 5.1.4.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_VPS8 0.50 45.0 2.91e-01 98.8% 71.4%
3261490 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 43.0 3.38e-01 100.0% 78.0%
D4 medium residues 465-486_561-595
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wyhB06 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.55 41.0 2.67e-01 82.5% 77.4%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 44.0 3.81e-01 93.0% 92.6%
4gp0B02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 37.0 2.96e-01 75.4% 56.1%
2bhoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 40.0 3.32e-01 94.7% 44.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4022346 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.56 44.0 2.85e-01 93.0% 84.0%
5036228 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.55 46.0 2.86e-01 98.2% 53.0%
3283053 383.2.1.0 few secondary structure elements › Defensin-like 0.53 39.0 3.17e-01 80.7% 42.1%
4929392 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.52 35.0 3.09e-01 89.5% 44.4%
3700776 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.52 37.0 3.48e-01 91.2% 61.4%
D5 medium residues 596-654
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yu0A01 2.10.10.30 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.67 48.0 5.12e-01 79.7% 90.2%
3hshE00 3.40.1620.70 Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › 0.65 45.0 4.68e-01 74.6% 80.0%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.63 50.0 2.96e-01 89.8% 10.9%
4pe5B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 51.0 3.70e-01 96.6% 85.9%
2l6oA01 2.40.10.320 Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain 0.58 41.0 3.86e-01 74.6% 76.4%
1wxrA03 3.30.160.280 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 43.0 4.04e-01 88.1% 78.9%
4gc1A01 2.90.10.10 Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain 0.55 41.0 3.47e-01 96.6% 47.1%
4okcA01 2.90.10.10 Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain 0.54 38.0 3.65e-01 89.8% 63.8%
2lojA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.54 35.0 3.95e-01 72.9% 100.0%
6z46V01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.53 42.0 3.20e-01 98.3% 59.9%
3ejxA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.53 42.0 3.33e-01 96.6% 86.4%
1rsgA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 36.0 2.52e-01 76.3% 82.0%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 35.0 3.21e-01 71.2% 66.7%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2495545 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.72 57.0 3.32e-01 88.1% 11.0%
3528795 3761.1.1.0 beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related 0.69 50.0 5.48e-01 91.5% 100.0%
1820980 79.1.1.2 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Hyaluronidase_1 0.69 51.0 3.47e-01 89.8% 22.2%
3921177 3761.1.1.0 beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related 0.68 48.0 4.93e-01 89.8% 80.0%
5002640 3761.1.1.1 beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N 0.63 45.0 4.77e-01 79.7% 100.0%
4025635 874.1.1.0 a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain 0.60 45.0 3.28e-01 86.4% 83.5%
4578847 702.1.1.3 beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.58 45.0 2.83e-01 86.4% 29.1%
4819490 702.1.1.3 beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 0.58 41.0 3.01e-01 74.6% 67.5%
4927153 375.1.1.63 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular 0.56 38.0 3.91e-01 71.2% 76.4%
4999472 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.55 45.0 3.26e-01 96.6% 72.6%
None 0.54 37.0 2.43e-01 72.9% 99.4%
4927354 2492.1.1.18 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB 0.54 41.0 3.56e-01 88.1% 96.2%
3681536 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 40.0 2.39e-01 79.7% 27.1%
3930915 3105.1.1.4 a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 0.54 44.0 3.38e-01 100.0% 86.1%
3719666 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.54 44.0 3.20e-01 93.2% 52.6%
4417898 286.1.1.1 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase 0.53 41.0 3.20e-01 93.2% 84.4%
3476114 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.51 39.0 2.39e-01 91.5% 12.3%
4032931 286.1.1.5 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › CntK_N 0.51 36.0 2.96e-01 78.0% 50.4%
4048173 286.1.1.1 a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase 0.50 41.0 3.42e-01 100.0% 95.8%