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IMGVR_UViG_3300032820_001765-3300032820-Ga0310342_1000087041
Arc-VirIMGVR_UViG_3300032820_001765-3300032820-Ga0310342_1000087041
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-118
Domain cluster:
rep: 5H_04062016_scaffold_1_prodigal-single.1__X__X__00437__D55-187
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 42.0 | 4.02e-01 | 70.1% | 88.8% |
| 5hp6A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 48.0 | 3.47e-01 | 87.2% | 64.2% |
| 4ffgA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 49.0 | 3.56e-01 | 91.5% | 50.9% |
| 1y4wA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 47.0 | 3.40e-01 | 89.7% | 51.5% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.58 | 51.0 | 4.55e-01 | 100.0% | 96.6% |
| 2carB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.57 | 41.0 | 3.53e-01 | 75.2% | 88.7% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.56 | 50.0 | 4.69e-01 | 100.0% | 88.4% |
| 3kspA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 3.78e-01 | 70.9% | 89.1% |
| 1a6zA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.54 | 39.0 | 3.45e-01 | 76.1% | 100.0% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 39.0 | 3.72e-01 | 76.1% | 96.5% |
| 2iqiB00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.53 | 46.0 | 4.17e-01 | 99.1% | 97.7% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 47.0 | 3.51e-01 | 97.4% | 90.0% |
| 3f7sA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 3.73e-01 | 77.8% | 92.3% |
| 3ef8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 42.0 | 3.95e-01 | 87.2% | 88.5% |
| 4bnqB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.52 | 43.0 | 3.70e-01 | 92.3% | 96.9% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.53e-01 | 72.6% | 91.5% |
| 2r5rA00 | 3.10.270.10 | Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; | 0.51 | 46.0 | 3.62e-01 | 100.0% | 76.4% |
| 3q9oA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 40.0 | 3.29e-01 | 84.6% | 73.6% |
| 4jhmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 35.0 | 3.58e-01 | 72.6% | 94.0% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941745 | 241.15.1.4 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › DUF932 | 0.74 | 62.0 | 5.70e-01 | 87.2% | 71.0% |
| 3228525 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.64 | 52.0 | 5.39e-01 | 91.5% | 93.6% |
| 3593270 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.62 | 51.0 | 4.09e-01 | 85.5% | 57.3% |
| 3285746 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.62 | 43.0 | 3.90e-01 | 70.1% | 80.0% |
| 3330850 | 243.3.1.12 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SQAPI | 0.59 | 42.0 | 4.46e-01 | 72.6% | 98.0% |
| 3236951 | 243.3.1.35 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 | 0.59 | 41.0 | 3.70e-01 | 70.9% | 86.9% |
| 3697337 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 45.0 | 4.10e-01 | 83.8% | 100.0% |
| 3995515 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 50.0 | 3.68e-01 | 96.6% | 85.7% |
| 3241166 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 41.0 | 3.79e-01 | 75.2% | 90.0% |
| 5065294 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.56 | 50.0 | 4.46e-01 | 100.0% | 80.6% |
| 3359496 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.56 | 46.0 | 3.52e-01 | 88.9% | 72.5% |
| 4059717 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 39.0 | 4.40e-01 | 85.5% | 100.0% |
| 3212332 | 243.1.1.85 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26531 | 0.55 | 42.0 | 4.10e-01 | 81.2% | 95.4% |
| 3813682 | 5.1.3.260 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2, b-prop_At3g26010-like | 0.55 | 45.0 | 3.31e-01 | 88.9% | 45.0% |
| 3929694 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 48.0 | 3.20e-01 | 99.1% | 75.6% |
| 3827531 | 844.1.1.5 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › DUF3527 | 0.54 | 44.0 | 3.49e-01 | 89.7% | 75.9% |
| 3881564 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.54 | 41.0 | 3.56e-01 | 81.2% | 60.6% |
| 3670829 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.53 | 44.0 | 3.25e-01 | 91.5% | 43.9% |
| 3593049 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 43.0 | 3.58e-01 | 92.3% | 95.7% |
| 3268067 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 35.0 | 3.37e-01 | 70.1% | 99.3% |
| 1174598 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.50 | 35.0 | 3.50e-01 | 72.6% | 87.3% |
| 3465399 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.50 | 43.0 | 3.48e-01 | 95.7% | 47.5% |
D2
high
residues 120-224
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.70 | 40.0 | 4.27e-01 | 70.5% | 63.8% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.70 | 50.0 | 5.59e-01 | 95.2% | 96.3% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 43.0 | 4.93e-01 | 92.4% | 100.0% |
| 1t6jA03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.62 | 49.0 | 5.03e-01 | 95.2% | 87.4% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.61 | 43.0 | 4.67e-01 | 100.0% | 89.7% |
| 2i7aA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 44.0 | 3.86e-01 | 96.2% | 52.2% |
| 1jfiB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.56 | 41.0 | 3.81e-01 | 88.6% | 59.3% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 40.0 | 4.40e-01 | 95.2% | 97.6% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.54 | 40.0 | 4.29e-01 | 93.3% | 94.2% |
| 3umcD02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 38.0 | 4.24e-01 | 87.6% | 100.0% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 47.0 | 4.56e-01 | 100.0% | 95.7% |
| 3frqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 41.0 | 3.44e-01 | 88.6% | 51.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3506517 | 7023.1.1.4 ↗ | alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › Tim17 | 0.68 | 58.0 | 5.51e-01 | 92.4% | 92.8% |
| 3319313 | 2006.1.4.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › Tim17 | 0.66 | 59.0 | 5.55e-01 | 96.2% | 92.0% |
| 3655557 | 148.1.1.25 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Tim17 | 0.65 | 58.0 | 5.45e-01 | 96.2% | 98.4% |
| 3416059 | 148.1.1.25 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Tim17 | 0.65 | 57.0 | 5.02e-01 | 96.2% | 75.5% |
| 3421325 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.63 | 45.0 | 4.98e-01 | 89.5% | 97.5% |
| 3715917 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.61 | 48.0 | 4.19e-01 | 85.7% | 73.9% |
| 3559913 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.60 | 46.0 | 4.40e-01 | 95.2% | 69.6% |
| 3188370 | 604.12.1.43 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Tim17 | 0.59 | 52.0 | 5.04e-01 | 97.1% | 100.0% |
| 5048989 | 109.4.1.3619 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TT21_C | 0.58 | 36.0 | 2.64e-01 | 95.2% | 22.6% |
| 4096162 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.58 | 49.0 | 5.01e-01 | 100.0% | 98.0% |
| 1395462 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.56 | 49.0 | 4.69e-01 | 99.0% | 82.3% |
| 3503552 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.56 | 41.0 | 3.70e-01 | 75.2% | 90.6% |
| 5057595 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.55 | 43.0 | 3.85e-01 | 84.8% | 72.9% |
| 3692198 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.54 | 48.0 | 3.49e-01 | 96.2% | 36.8% |
| 5034917 | 5076.2.1.13 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF7847 | 0.54 | 42.0 | 3.43e-01 | 84.8% | 47.5% |
| 3229748 | 1134.1.1.9 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › RSLD_CPSF6 | 0.52 | 34.0 | 3.73e-01 | 75.2% | 82.4% |
| 3459060 | 186.2.1.1 ↗ | alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box | 0.51 | 38.0 | 3.51e-01 | 79.0% | 59.7% |
| 3643758 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.50 | 38.0 | 3.37e-01 | 80.0% | 86.5% |