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IMGVR_UViG_3300032820_001765-3300032820-Ga0310342_1000087046

Arc-Vir

IMGVR_UViG_3300032820_001765-3300032820-Ga0310342_1000087046

Identity

Kingdom:
archaea

Quality

92.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-108
PDB
Domain cluster: rep: NC_048639.1__YP_009830587.1__HWA94_gp16__00016__D331-429
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4yibA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 77.0 6.18e-01 100.0% 84.8%
4hjzA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 77.0 5.91e-01 100.0% 87.4%
4c5fA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 77.0 6.04e-01 100.0% 94.6%
1qsaA03 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.81 75.0 5.88e-01 100.0% 81.5%
6cfcA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.81 72.0 5.78e-01 96.5% 85.7%
1am7A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.78 66.0 5.35e-01 90.7% 81.2%
2dqaA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.78 67.0 5.89e-01 93.0% 89.4%
1xsfA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.76 63.0 5.86e-01 90.7% 73.1%
7k5cB01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.75 65.0 5.27e-01 94.2% 80.5%
3p4tA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 38.0 3.21e-01 74.4% 71.3%
1o0wA01 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.51 41.0 3.53e-01 94.2% 66.9%
1pn5A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.50 42.0 4.17e-01 96.5% 92.5%
3nwoA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 40.0 2.83e-01 89.5% 85.6%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964630 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 79.0 6.26e-01 100.0% 65.9%
3979308 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 78.0 6.05e-01 100.0% 88.0%
3166094 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 77.0 6.01e-01 100.0% 91.4%
3965879 235.1.1.32 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 0.83 77.0 6.10e-01 100.0% 81.8%
3978377 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.83 77.0 5.79e-01 100.0% 78.5%
4164050 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 77.0 5.68e-01 100.0% 74.6%
4258903 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 77.0 6.08e-01 100.0% 93.3%
4205221 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 77.0 6.13e-01 100.0% 93.8%
2393514 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 76.0 5.78e-01 100.0% 84.2%
3385979 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 76.0 5.76e-01 100.0% 70.5%
4321901 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 76.0 5.77e-01 100.0% 82.7%
3945171 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 75.0 6.23e-01 100.0% 82.1%
3971115 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.81 75.0 5.89e-01 100.0% 86.5%
3941811 235.1.1.32 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 0.81 75.0 5.89e-01 100.0% 82.9%
3587369 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.81 59.0 6.75e-01 84.9% 100.0%
3839661 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.79 73.0 5.72e-01 100.0% 82.9%
3279121 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.77 70.0 6.84e-01 98.8% 100.0%
3970721 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.77 70.0 5.49e-01 100.0% 80.6%
3284481 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.77 69.0 5.88e-01 100.0% 85.0%
185214 235.1.1.14 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas 0.77 64.0 6.37e-01 90.7% 87.5%
3978932 235.1.1.35 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › DUF1615 0.76 69.0 5.21e-01 100.0% 86.9%
4009649 632.3.1.13 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF1615 0.76 69.0 5.57e-01 100.0% 80.5%
3710513 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 50.0 4.61e-01 89.5% 67.3%
3728729 4996.1.1.2 ↗ alpha arrays › DNA-binding domain of EIN3-like › DNA-binding domain of EIN3-like › DNA-binding domain of EIN3-like › DUF2841 0.56 44.0 3.62e-01 86.0% 84.4%
3704903 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.53 37.0 2.82e-01 70.9% 64.4%
3925720 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.52 40.0 2.97e-01 89.5% 73.9%
3879746 601.7.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Ribonuc_2-5A 0.51 43.0 4.10e-01 94.2% 81.9%
3220576 3930.1.1.0 ↗ alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase 0.51 34.0 3.00e-01 70.9% 42.9%
3277870 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 36.0 3.45e-01 76.7% 64.0%