IMGVR_UViG_3300033141_000944-3300033141-Ga0366833_100713520

Arc-Vir

Identity

82.0 mean pLDDT

View cluster (13 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 312-412

PDB

D2 medium residues 1-58_144-311

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ci0J01	3.10.610.10	Alpha Beta › Roll › Pili subunits › GSPII I/J protein-like	0.59	23.0	3.37e-01	72.1%	76.0%
2it9A00	2.30.31.10	Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A	0.53	25.0	3.38e-01	76.1%	83.3%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3942943	4056.1.1.1 ↗	beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6	0.64	55.0	5.27e-01	88.9%	100.0%
3265780	3529.1.1.1 ↗	beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault	0.54	17.0	3.17e-01	85.8%	100.0%
3605089	3529.1.1.1 ↗	beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault	0.53	16.0	3.10e-01	85.4%	100.0%

D3 medium residues 117-143_456-487

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1cmjA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.60	50.0	3.07e-01	98.3%	39.6%
4kh7B02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.57	47.0	3.80e-01	93.2%	74.6%
7odhL01	1.10.645.10	Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B	0.56	47.0	2.74e-01	93.2%	83.7%
3kxqA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.51	46.0	3.03e-01	100.0%	81.0%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4014363	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.63	47.0	3.31e-01	78.0%	67.6%

D4 medium residues 488-619

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6c1qB02	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.51	42.0	3.36e-01	89.4%	55.2%
3t6gB00	1.20.120.230	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like	0.51	35.0	3.54e-01	71.2%	81.3%
3mkzN00	1.10.10.2830	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.50	39.0	4.22e-01	89.4%	100.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3612757	1030.1.1.0 ↗	alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2	0.52	39.0	3.64e-01	78.0%	76.2%
3368178	5069.1.3.73 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › PF25886	0.51	45.0	4.14e-01	100.0%	100.0%