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IMGVR_UViG_3300033141_000944-3300033141-Ga0366833_100713528

Arc-Vir

IMGVR_UViG_3300033141_000944-3300033141-Ga0366833_100713528

Quality

57.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 771-914
PDB
D2 medium residues 72-198_329-368
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10145.15 best PhageMin_Tail 39.2 1.00e-09 76.6% 56.7%
D3 medium residues 199-328
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10145.15 best PhageMin_Tail 38.1 2.30e-09 100.0% 44.3%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2np5D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 33.0 3.08e-01 76.2% 42.4%
3himA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 33.0 2.98e-01 81.5% 39.5%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 36.0 4.10e-01 93.8% 100.0%
3k7dA01 1.20.120.1510 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 36.0 3.81e-01 90.8% 84.1%
3n00A00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.51 37.0 3.36e-01 76.2% 77.7%
2jbwA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.51 31.0 3.47e-01 84.6% 76.7%
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.50 40.0 4.20e-01 96.2% 96.5%
1puoB00 1.20.920.50 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.50 41.0 4.00e-01 88.5% 86.6%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030882 159.1.2.6 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail 0.85 81.0 6.71e-01 100.0% 63.8%
3945172 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.66 58.0 4.93e-01 96.2% 60.5%
3265791 5051.1.1.10 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 0.51 42.0 2.91e-01 89.2% 89.9%
D4 medium residues 369-487
PDB
D5 medium residues 656-712
PDB