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IMGVR_UViG_3300033143_005460-3300033143-Ga0366829_10257611
Arc-VirIMGVR_UViG_3300033143_005460-3300033143-Ga0366829_10257611
Identity
- Kingdom:
- archaea
Quality
92.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-105
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03851.21 best | UvdE | 52.6 | 5.60e-14 | 100.0% | 30.9% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tc3B00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.92 | 79.0 | 5.44e-01 | 100.0% | 31.0% |
| 2j6vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.90 | 77.0 | 5.36e-01 | 100.0% | 32.1% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 50.0 | 4.81e-01 | 95.0% | 79.5% |
| 1v7mV00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.58 | 46.0 | 4.14e-01 | 87.1% | 82.8% |
| 3ooqA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.57 | 42.0 | 3.01e-01 | 76.2% | 55.7% |
| 1t7lA02 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.56 | 49.0 | 3.42e-01 | 100.0% | 39.4% |
| 1db3A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 48.0 | 3.84e-01 | 100.0% | 69.4% |
| 2i7nA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 49.0 | 4.25e-01 | 99.0% | 76.8% |
| 1d2kA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 46.0 | 3.21e-01 | 91.1% | 33.7% |
| 4y9jA01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 41.0 | 3.63e-01 | 80.2% | 80.5% |
| 3m1mA03 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.51 | 43.0 | 4.21e-01 | 96.0% | 85.5% |
| 2f2bA00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.51 | 45.0 | 3.42e-01 | 100.0% | 68.6% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4451304 | 2002.1.1.118 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › UvdE | 0.93 | 80.0 | 5.41e-01 | 100.0% | 29.0% |
| 5068591 | 2002.1.1.118 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › UvdE | 0.93 | 80.0 | 5.44e-01 | 100.0% | 30.0% |
| 4573847 | 2002.1.1.118 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › UvdE | 0.91 | 75.0 | 4.82e-01 | 100.0% | 22.5% |
| 3517974 | 2002.1.1.118 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › UvdE | 0.90 | 86.0 | 6.14e-01 | 100.0% | 41.2% |
| 4468081 | 2002.1.1.118 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › UvdE | 0.89 | 83.0 | 5.59e-01 | 100.0% | 30.6% |
| 4177324 | 2002.1.1.118 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › UvdE | 0.86 | 81.0 | 5.46e-01 | 100.0% | 31.2% |
| 3366795 | 109.4.1.1637 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U3_assoc_6, UTP6_C | 0.62 | 52.0 | 3.43e-01 | 100.0% | 21.3% |
| 3907391 | 109.25.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A | 0.59 | 51.0 | 5.01e-01 | 95.0% | 97.3% |
| 3675630 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 47.0 | 3.90e-01 | 88.1% | 85.4% |
| 3171700 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 43.0 | 3.85e-01 | 93.1% | 55.9% |
| 3181713 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 49.0 | 3.76e-01 | 100.0% | 71.2% |
| 4101533 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.53 | 47.0 | 3.15e-01 | 98.0% | 30.8% |
| 4957803 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.52 | 43.0 | 3.42e-01 | 94.1% | 73.9% |
| 3895523 | 601.1.2.75 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PTPLA | 0.51 | 43.0 | 3.40e-01 | 93.1% | 94.9% |