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IMGVR_UViG_3300033143_007987-3300033143-Ga0366829_10146551
Arc-VirIMGVR_UViG_3300033143_007987-3300033143-Ga0366829_10146551
Identity
- Kingdom:
- archaea
Quality
68.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-236
Domain cluster:
rep: IMGVR_UViG_3300020814_000341-3300020814-Ga0214088_182449110__D102-238
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 30.0 | 3.94e-01 | 89.5% | 80.4% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 30.0 | 3.96e-01 | 88.4% | 81.9% |
| 4npsA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 17.0 | 3.12e-01 | 84.7% | 75.9% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.58 | 33.0 | 4.04e-01 | 90.5% | 88.7% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 32.0 | 3.99e-01 | 90.0% | 89.9% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.56 | 31.0 | 4.03e-01 | 85.8% | 96.2% |
| 2zomA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 29.0 | 3.74e-01 | 89.5% | 86.0% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.56 | 30.0 | 3.89e-01 | 91.1% | 94.2% |
| 5wy8B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 33.0 | 4.13e-01 | 96.3% | 99.1% |
| 2joeA01 | 3.30.1830.10 | Alpha Beta › 2-Layer Sandwich › YehR-like fold › YehR-like | 0.54 | 33.0 | 3.98e-01 | 94.7% | 91.4% |
| 1xmbA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 29.0 | 3.80e-01 | 88.4% | 97.0% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3954964 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.85 | 63.0 | 7.22e-01 | 90.0% | 98.6% |
| 5083161 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.85 | 62.0 | 7.10e-01 | 86.8% | 97.2% |
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.82 | 59.0 | 6.84e-01 | 86.8% | 100.0% |
| 5039158 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.81 | 66.0 | 7.20e-01 | 86.8% | 100.0% |
| 4032431 | 50.1.1.3 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S78 | 0.80 | 60.0 | 6.62e-01 | 86.3% | 93.5% |
| 4943559 | 304.16.1.0 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like | 0.65 | 32.0 | 4.39e-01 | 90.5% | 95.5% |
| 4992631 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.65 | 31.0 | 4.29e-01 | 85.8% | 93.3% |
| 4666632 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 32.0 | 4.21e-01 | 88.4% | 87.0% |
| 3270398 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.64 | 30.0 | 4.30e-01 | 88.4% | 94.4% |
| 3340180 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.63 | 34.0 | 4.54e-01 | 85.8% | 99.0% |
| 3718671 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.62 | 34.0 | 3.11e-01 | 76.3% | 38.8% |
| 3873214 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.62 | 32.0 | 4.38e-01 | 95.8% | 97.9% |
| 3703269 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 38.0 | 4.68e-01 | 90.0% | 99.1% |
| 5044954 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.61 | 28.0 | 4.01e-01 | 87.9% | 98.8% |
| 4562905 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.61 | 31.0 | 3.69e-01 | 92.1% | 71.2% |
| 4395470 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.59 | 33.0 | 4.31e-01 | 90.0% | 98.1% |
| 3261290 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.59 | 38.0 | 4.52e-01 | 96.3% | 96.8% |
| 3987460 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.58 | 32.0 | 4.08e-01 | 82.1% | 91.8% |
| 3619535 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.57 | 33.0 | 4.15e-01 | 88.4% | 95.6% |
| 4943376 | 304.10.1.3 ↗ | a+b two layers › Alpha-beta plaits › RuBisCO, large subunit, small (N-terminal) domain › RuBisCO, large subunit, small (N-terminal) domain › RuBisCO_large | 0.57 | 33.0 | 4.10e-01 | 88.4% | 93.0% |
| 4001734 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.56 | 33.0 | 4.09e-01 | 88.9% | 94.8% |
| 3429644 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 31.0 | 3.39e-01 | 79.5% | 63.1% |
| 3824928 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 4.37e-01 | 95.3% | 93.1% |
| 3981111 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.55 | 33.0 | 3.67e-01 | 72.6% | 72.9% |
| 3973898 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.54 | 34.0 | 3.87e-01 | 72.1% | 82.1% |
| 3968643 | 241.1.1.8 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2170 | 0.54 | 28.0 | 3.26e-01 | 82.1% | 66.7% |
| 3246291 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.52 | 32.0 | 3.89e-01 | 86.8% | 92.9% |
| 4538400 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.50 | 31.0 | 3.71e-01 | 93.7% | 90.0% |