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IMGVR_UViG_3300033143_007987-3300033143-Ga0366829_10146555
Arc-VirIMGVR_UViG_3300033143_007987-3300033143-Ga0366829_10146555
Identity
- Kingdom:
- archaea
Quality
87.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-147
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cxiA03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.56 | 31.0 | 3.93e-01 | 75.7% | 90.0% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.53 | 30.0 | 3.32e-01 | 87.8% | 68.5% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3485346 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 38.0 | 4.52e-01 | 76.5% | 93.3% |
| 4174817 | 327.16.1.17 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF27474 | 0.58 | 27.0 | 3.78e-01 | 74.8% | 100.0% |
| 3564613 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 35.0 | 4.19e-01 | 75.7% | 92.0% |
| 3778534 | 101.1.2.45 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP | 0.58 | 37.0 | 4.01e-01 | 77.4% | 77.9% |
| 3475579 | 101.1.2.45 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP | 0.57 | 38.0 | 4.09e-01 | 81.7% | 78.0% |
| 5011032 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.56 | 27.0 | 3.50e-01 | 73.9% | 85.0% |
| 4391995 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.55 | 30.0 | 3.46e-01 | 87.8% | 71.8% |
| 5039226 | 3016.1.1.19 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › KYNU_C | 0.55 | 33.0 | 3.98e-01 | 86.1% | 95.7% |
| 4381495 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.54 | 30.0 | 3.36e-01 | 87.8% | 67.8% |
| 4990256 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.53 | 34.0 | 4.08e-01 | 70.4% | 93.8% |
| 5028979 | 205.1.1.20 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 | 0.53 | 33.0 | 3.84e-01 | 93.9% | 100.0% |
| 3633917 | 304.7.1.21 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › PF30773 | 0.53 | 32.0 | 3.53e-01 | 83.5% | 73.7% |
| 5048051 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.53 | 32.0 | 3.53e-01 | 87.8% | 76.4% |
| 4942278 | 205.1.1.20 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 | 0.52 | 33.0 | 3.75e-01 | 93.0% | 92.3% |
| 4028677 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 4.02e-01 | 80.9% | 91.4% |
| 4995545 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.51 | 34.0 | 3.75e-01 | 87.0% | 86.0% |