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IMGVR_UViG_3300033144_002417-3300033144-Ga0366838_101090816
Arc-VirIMGVR_UViG_3300033144_002417-3300033144-Ga0366838_101090816
Identity
- Kingdom:
- archaea
Quality
62.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-112
Domain cluster:
rep: NC_031938.1__YP_009324532.1__BOW78_gp09__00009__D4-122
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.82 | 34.0 | 3.14e-01 | 100.0% | 31.7% |
| 2ee3A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 38.0 | 3.89e-01 | 81.8% | 57.4% |
| 1i1rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 37.0 | 3.94e-01 | 80.0% | 60.0% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.66 | 47.0 | 4.58e-01 | 94.5% | 66.4% |
| 4eq3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 39.0 | 4.17e-01 | 81.8% | 69.4% |
| 4hd5A01 | 2.60.40.3760 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 38.0 | 4.10e-01 | 80.0% | 70.1% |
| 4hkhA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.61 | 54.0 | 4.92e-01 | 100.0% | 98.0% |
| 1x5hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 37.0 | 3.49e-01 | 84.5% | 50.8% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 30.0 | 3.27e-01 | 85.5% | 53.7% |
| 8egxA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.60 | 34.0 | 3.60e-01 | 80.0% | 61.4% |
| 3nsjA02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.59 | 40.0 | 3.84e-01 | 99.1% | 60.2% |
| 3d3lA02 | 3.10.450.60 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 31.0 | 3.58e-01 | 100.0% | 68.8% |
| 3he1A00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.58 | 51.0 | 4.73e-01 | 100.0% | 86.4% |
| 2ep6A01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 41.0 | 3.98e-01 | 100.0% | 67.2% |
| 3b7yA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.56 | 44.0 | 4.08e-01 | 100.0% | 64.6% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 38.0 | 3.82e-01 | 90.9% | 67.6% |
| 5a2fA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 37.0 | 3.76e-01 | 90.9% | 67.0% |
| 4igdA01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.56 | 28.0 | 3.50e-01 | 97.3% | 79.1% |
| 2nq3A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.56 | 42.0 | 4.03e-01 | 100.0% | 67.9% |
| 7a1rA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 41.0 | 4.00e-01 | 100.0% | 71.2% |
| 6cxhA03 | 2.60.40.1580 | Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 | 0.55 | 43.0 | 4.08e-01 | 84.5% | 74.3% |
| 3jzyA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.55 | 41.0 | 3.96e-01 | 100.0% | 69.4% |
| 2m2dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 3.73e-01 | 89.1% | 66.1% |
| 2petA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 3.78e-01 | 90.9% | 68.1% |
| 1b78A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.54 | 41.0 | 3.52e-01 | 100.0% | 48.4% |
| 2b3rA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 42.0 | 4.06e-01 | 100.0% | 72.6% |
| 3l9bA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 40.0 | 3.91e-01 | 100.0% | 69.8% |
| 1djxA03 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 40.0 | 3.84e-01 | 100.0% | 67.2% |
| 2z0uA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 42.0 | 3.99e-01 | 100.0% | 71.1% |
| 3fdwA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 41.0 | 3.89e-01 | 100.0% | 68.5% |
| 1gmiA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 38.0 | 3.61e-01 | 100.0% | 61.5% |
| 1rh8A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 44.0 | 4.04e-01 | 100.0% | 69.7% |
| 5h4zA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 40.0 | 3.82e-01 | 100.0% | 69.0% |
| 4jcmA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.94e-01 | 99.1% | 81.7% |
| 4bnqB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.52 | 41.0 | 3.46e-01 | 100.0% | 49.0% |
| 2cm5A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 42.0 | 3.91e-01 | 100.0% | 68.5% |
| 6kxkB02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 42.0 | 3.90e-01 | 100.0% | 71.1% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4140243 | 1.1.5.82 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 | 0.69 | 59.0 | 5.90e-01 | 100.0% | 90.4% |
| 3254204 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.67 | 41.0 | 4.76e-01 | 98.2% | 85.0% |
| 3899289 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.66 | 53.0 | 3.94e-01 | 100.0% | 33.6% |
| 4057590 | 1.1.5.86 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN3 | 0.66 | 52.0 | 4.81e-01 | 100.0% | 65.7% |
| 3942090 | 1.1.5.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube | 0.64 | 58.0 | 5.06e-01 | 100.0% | 75.8% |
| 5083300 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.63 | 57.0 | 5.22e-01 | 100.0% | 92.4% |
| 4009489 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.61 | 54.0 | 4.90e-01 | 100.0% | 94.8% |
| 3640946 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.61 | 43.0 | 4.01e-01 | 100.0% | 57.9% |
| 1124583 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.61 | 54.0 | 4.92e-01 | 100.0% | 98.0% |
| 3278330 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.60 | 44.0 | 4.36e-01 | 100.0% | 73.0% |
| 4015818 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.59 | 43.0 | 3.95e-01 | 100.0% | 57.2% |
| 3899515 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.59 | 43.0 | 3.95e-01 | 100.0% | 58.6% |
| 3174840 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.59 | 44.0 | 4.31e-01 | 99.1% | 71.7% |
| 3899516 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.59 | 42.0 | 3.79e-01 | 100.0% | 53.5% |
| 3904175 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 41.0 | 3.66e-01 | 99.1% | 51.6% |
| 3175675 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 41.0 | 3.95e-01 | 100.0% | 63.1% |
| 3787098 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 44.0 | 4.16e-01 | 100.0% | 65.9% |
| 3254373 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 43.0 | 3.97e-01 | 100.0% | 60.0% |
| 3261892 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.58 | 42.0 | 3.99e-01 | 100.0% | 62.2% |
| 11195 | 2484.1.1.56 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDR | 0.57 | 32.0 | 3.47e-01 | 100.0% | 64.1% |
| 3816117 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 42.0 | 3.94e-01 | 100.0% | 61.4% |
| 3171495 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 44.0 | 4.08e-01 | 100.0% | 64.3% |
| 3264380 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 41.0 | 3.90e-01 | 100.0% | 63.1% |
| 3247063 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 38.0 | 3.88e-01 | 80.9% | 70.5% |
| 3474329 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.57 | 43.0 | 4.07e-01 | 100.0% | 65.9% |
| 3253550 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 40.0 | 3.81e-01 | 100.0% | 60.7% |
| 3472123 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 42.0 | 4.00e-01 | 100.0% | 65.2% |
| 3552402 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 43.0 | 3.72e-01 | 100.0% | 52.9% |
| 3192615 | 868.1.1.8 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › SLS1_C | 0.56 | 43.0 | 3.13e-01 | 83.6% | 45.9% |
| 3751713 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 43.0 | 3.89e-01 | 100.0% | 60.7% |
| 3769529 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 43.0 | 3.79e-01 | 100.0% | 56.9% |
| 3166569 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 42.0 | 3.93e-01 | 100.0% | 65.9% |
| 3644439 | 11.2.1.71 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_GRDP | 0.55 | 40.0 | 3.84e-01 | 100.0% | 65.4% |
| 3616898 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 43.0 | 3.89e-01 | 100.0% | 61.3% |
| 3917104 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 43.0 | 3.98e-01 | 100.0% | 66.4% |
| 4127750 | 11.2.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2, FerB | 0.54 | 41.0 | 2.89e-01 | 100.0% | 24.1% |
| 3715221 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 40.0 | 3.47e-01 | 100.0% | 49.1% |
| 3712347 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 42.0 | 3.95e-01 | 100.0% | 67.4% |
| 3275243 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 45.0 | 3.99e-01 | 89.1% | 80.0% |
| 3489182 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.54 | 43.0 | 4.08e-01 | 100.0% | 72.3% |
| 3564916 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 42.0 | 3.96e-01 | 100.0% | 68.1% |
| 3529726 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 40.0 | 3.87e-01 | 100.0% | 67.7% |
| 3496237 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.53 | 42.0 | 3.88e-01 | 100.0% | 64.8% |
| 3223178 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 41.0 | 3.85e-01 | 100.0% | 65.0% |
| 3490679 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 43.0 | 3.88e-01 | 100.0% | 62.6% |
| 3539814 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 44.0 | 4.17e-01 | 90.9% | 85.9% |
| 3619973 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 30.0 | 3.42e-01 | 82.7% | 75.0% |
| 3469974 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 40.0 | 3.90e-01 | 100.0% | 71.2% |
| 3881290 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 41.0 | 3.74e-01 | 100.0% | 62.8% |
| 3788156 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.53 | 42.0 | 3.07e-01 | 100.0% | 30.6% |
| 3882078 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 41.0 | 3.88e-01 | 100.0% | 68.1% |
| 3888760 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 41.0 | 3.72e-01 | 100.0% | 61.3% |
| 3462475 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.52 | 41.0 | 3.82e-01 | 100.0% | 66.4% |
| 3480782 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 42.0 | 3.89e-01 | 100.0% | 68.3% |
| 3869375 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 41.0 | 3.73e-01 | 100.0% | 64.8% |
| 3411622 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.51 | 44.0 | 3.74e-01 | 100.0% | 56.8% |
| 4466168 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 39.0 | 3.45e-01 | 100.0% | 56.2% |
| 3176266 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 41.0 | 3.85e-01 | 100.0% | 71.9% |
| 3743844 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 40.0 | 3.79e-01 | 100.0% | 70.4% |
| 3636520 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.50 | 40.0 | 3.46e-01 | 100.0% | 55.3% |
D2
medium
residues 113-149_161-250_359-373
Domain cluster:
rep: IMGVR_UViG_3300033388_002076-3300033388-Ga0370355_101957510__D114-254
D3
medium
residues 150-160_315-358_374-416
D4
medium
residues 462-554