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IMGVR_UViG_3300033144_002417-3300033144-Ga0366838_10109083
Arc-VirIMGVR_UViG_3300033144_002417-3300033144-Ga0366838_10109083
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 28-135
Domain cluster:
rep: ON286972.1__USL83473.1__A4_397__00152__D20-123
D2
high
residues 141-186
Domain cluster:
rep: ON526839.1__URG17631.1__GRN51_150__00015__D54-100
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.90 | 81.0 | 7.07e-01 | 100.0% | 67.6% |
| 3bxwA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.60 | 52.0 | 4.93e-01 | 100.0% | 96.4% |
| 6zepA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.60 | 48.0 | 2.97e-01 | 97.8% | 83.8% |
| 2qqrA02 | 3.10.330.70 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.59 | 50.0 | 4.82e-01 | 100.0% | 94.3% |
| 3rkgA01 | 2.40.128.330 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 45.0 | 3.79e-01 | 100.0% | 80.9% |
| 3ikwA02 | 3.10.540.20 | Alpha Beta › Roll › duf1285 like fold › | 0.56 | 46.0 | 4.18e-01 | 100.0% | 92.9% |
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.56 | 46.0 | 4.70e-01 | 93.5% | 100.0% |
| 3fmaA00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.55 | 43.0 | 3.68e-01 | 91.3% | 66.7% |
| 2la7A01 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 44.0 | 3.40e-01 | 100.0% | 85.2% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2876 | 101.1.14.2 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › I-HmuI_NUMOD-like | 0.90 | 81.0 | 7.03e-01 | 100.0% | 66.7% |
| 3296049 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.70 | 58.0 | 3.80e-01 | 100.0% | 32.1% |
| 3587703 | 101.1.14.0 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases | 0.66 | 54.0 | 5.30e-01 | 100.0% | 90.0% |
| 4414927 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.66 | 54.0 | 4.88e-01 | 100.0% | 68.1% |
| 3925701 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.66 | 45.0 | 3.61e-01 | 100.0% | 35.8% |
| 3171408 | 101.1.14.3 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › NUMOD1 | 0.65 | 51.0 | 5.09e-01 | 97.8% | 92.0% |
| 3227231 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.62 | 44.0 | 4.00e-01 | 100.0% | 55.6% |
| 4024679 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.57 | 39.0 | 3.65e-01 | 100.0% | 56.7% |
| 3949142 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 38.0 | 4.15e-01 | 100.0% | 94.3% |
| 3933682 | 822.1.1.0 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain | 0.51 | 39.0 | 3.07e-01 | 91.3% | 41.7% |
| 3514894 | 386.1.1.337 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › CCDC174_GRSR | 0.51 | 31.0 | 3.30e-01 | 93.5% | 86.7% |