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IMGVR_UViG_3300033144_009016-3300033144-Ga0366838_10008712
Arc-VirIMGVR_UViG_3300033144_009016-3300033144-Ga0366838_10008712
Identity
- Kingdom:
- archaea
Quality
56.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-76
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h7oA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 48.0 | 4.06e-01 | 100.0% | 44.6% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 47.0 | 4.13e-01 | 100.0% | 51.5% |
| 2hlcA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 44.0 | 3.88e-01 | 100.0% | 47.1% |
| 5ee2A00 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.64 | 53.0 | 4.47e-01 | 95.6% | 83.6% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.64 | 54.0 | 3.89e-01 | 100.0% | 48.6% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.63 | 51.0 | 4.36e-01 | 98.5% | 55.0% |
| 4zrxA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.63 | 40.0 | 3.48e-01 | 95.6% | 41.0% |
| 1g2bA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 46.0 | 4.78e-01 | 77.9% | 87.1% |
| 3tk9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 43.0 | 3.73e-01 | 73.5% | 77.6% |
| 4yo1A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 41.0 | 3.81e-01 | 72.1% | 78.7% |
| 3n91A02 | 2.40.128.420 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 49.0 | 4.06e-01 | 97.1% | 97.8% |
| 3ejbB01 | 3.30.43.20 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › | 0.59 | 36.0 | 3.43e-01 | 72.1% | 50.6% |
| 3v8uA04 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 48.0 | 3.87e-01 | 92.6% | 66.7% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.59 | 41.0 | 3.43e-01 | 97.1% | 40.0% |
| 2vl6A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.59 | 40.0 | 4.50e-01 | 95.6% | 100.0% |
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 37.0 | 4.20e-01 | 94.1% | 89.8% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.58 | 48.0 | 4.25e-01 | 95.6% | 97.2% |
| 6qwrA01 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 48.0 | 3.59e-01 | 95.6% | 99.5% |
| 3e8lC00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 49.0 | 3.74e-01 | 100.0% | 93.8% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.58 | 39.0 | 4.27e-01 | 97.1% | 96.0% |
| 5wfiA01 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 38.0 | 3.22e-01 | 97.1% | 38.0% |
| 3cp7A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 43.0 | 3.73e-01 | 100.0% | 50.5% |
| 2lktA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.57 | 50.0 | 4.10e-01 | 98.5% | 53.6% |
| 4hwmA00 | 2.40.128.500 | Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein | 0.57 | 49.0 | 4.17e-01 | 100.0% | 73.5% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 37.0 | 3.89e-01 | 94.1% | 76.7% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 45.0 | 3.31e-01 | 95.6% | 97.7% |
| 4rt0A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.55 | 40.0 | 3.48e-01 | 95.6% | 48.6% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.55 | 45.0 | 3.30e-01 | 98.5% | 30.5% |
| 2qeaB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 39.0 | 3.14e-01 | 97.1% | 34.6% |
| 1flmA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 45.0 | 3.76e-01 | 92.6% | 86.9% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 45.0 | 3.35e-01 | 95.6% | 74.2% |
| 3liuA01 | 2.60.40.3160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 40.0 | 3.44e-01 | 100.0% | 47.5% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.54 | 37.0 | 4.00e-01 | 100.0% | 94.4% |
| 2r0xA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 44.0 | 3.47e-01 | 95.6% | 83.3% |
| 2v72A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 35.0 | 2.86e-01 | 95.6% | 33.6% |
| 7ufsA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.52 | 41.0 | 2.81e-01 | 86.8% | 79.3% |
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.52 | 36.0 | 3.54e-01 | 94.1% | 66.7% |
| 2rm4A01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 4.02e-01 | 98.5% | 89.4% |
| 3cpxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.51 | 38.0 | 3.92e-01 | 88.2% | 88.7% |
| 3ic8A01 | 3.40.30.110 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.51 | 37.0 | 2.80e-01 | 98.5% | 29.9% |
| 4xhyA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 43.0 | 3.39e-01 | 100.0% | 45.3% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.67e-01 | 98.5% | 78.8% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1031557 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.62 | 46.0 | 4.78e-01 | 77.9% | 87.1% |
| 135648 | 4.1.1.142 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq_1 | 0.62 | 41.0 | 4.23e-01 | 98.5% | 72.3% |
| 3968213 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 44.0 | 2.92e-01 | 80.9% | 23.2% |
| 78 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.59 | 41.0 | 3.43e-01 | 97.1% | 40.0% |
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.59 | 41.0 | 3.70e-01 | 98.5% | 49.5% |
| 3484084 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 3.93e-01 | 79.4% | 73.7% |
| 167340 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.59 | 37.0 | 4.20e-01 | 94.1% | 89.8% |
| 3968432 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 39.0 | 3.50e-01 | 97.1% | 45.7% |
| 4985969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 4.18e-01 | 100.0% | 83.3% |
| 3604145 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 41.0 | 4.26e-01 | 100.0% | 86.7% |
| 3791975 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.57 | 51.0 | 3.40e-01 | 100.0% | 54.4% |
| 3966494 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.57 | 41.0 | 3.59e-01 | 97.1% | 48.2% |
| None | — | 0.57 | 51.0 | 3.57e-01 | 100.0% | 67.3% | |
| 1096110 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.57 | 51.0 | 3.56e-01 | 100.0% | 67.6% |
| 4953054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 40.0 | 3.95e-01 | 100.0% | 69.3% |
| 4451993 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.57 | 38.0 | 4.01e-01 | 98.5% | 80.0% |
| 4936291 | 4.1.1.487 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7205 | 0.56 | 41.0 | 4.20e-01 | 100.0% | 83.1% |
| 4163851 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 37.0 | 3.89e-01 | 94.1% | 76.7% |
| 2526961 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.56 | 50.0 | 3.50e-01 | 100.0% | 66.1% |
| 1263519 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.56 | 37.0 | 3.85e-01 | 97.1% | 75.8% |
| 3964733 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 39.0 | 4.23e-01 | 100.0% | 94.5% |
| 5057445 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.55 | 38.0 | 3.60e-01 | 100.0% | 58.8% |
| 134809 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.55 | 49.0 | 3.37e-01 | 100.0% | 55.7% |
| 4432348 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.55 | 38.0 | 3.85e-01 | 100.0% | 73.5% |
| 4342488 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 36.0 | 3.77e-01 | 100.0% | 74.6% |
| 5051302 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.55 | 47.0 | 3.35e-01 | 100.0% | 56.0% |
| None | — | 0.55 | 48.0 | 3.40e-01 | 100.0% | 67.4% | |
| 4033340 | 3386.1.1.0 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related | 0.54 | 45.0 | 3.91e-01 | 97.1% | 76.1% |
| 4128902 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 37.0 | 4.01e-01 | 97.1% | 98.0% |
| 5001903 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 37.0 | 3.75e-01 | 100.0% | 72.9% |
| 3950458 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.54 | 42.0 | 3.25e-01 | 89.7% | 95.0% |
| 4091379 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 42.0 | 4.20e-01 | 88.2% | 82.9% |
| 4044896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 36.0 | 3.58e-01 | 100.0% | 65.3% |
| 3602921 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 4.01e-01 | 100.0% | 94.5% |
| 5063433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 35.0 | 3.85e-01 | 97.1% | 94.0% |
| 4149821 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 35.0 | 3.68e-01 | 100.0% | 80.0% |
| 4429329 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.52 | 36.0 | 3.71e-01 | 95.6% | 76.9% |
| 5064457 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.52 | 35.0 | 3.54e-01 | 97.1% | 68.6% |
| 5074749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 35.0 | 3.54e-01 | 98.5% | 70.0% |
| 3036710 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 35.0 | 3.60e-01 | 100.0% | 76.2% |
| 4941512 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 35.0 | 3.53e-01 | 94.1% | 70.0% |
| 4368811 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.52 | 36.0 | 3.82e-01 | 100.0% | 92.7% |
| 4846751 | 566.2.1.1 ↗ | alpha complex topology › P40 nucleoprotein-like › Rhabdovirus nucleocapsid protein › Rhabdovirus nucleocapsid protein › Rhabdo_ncap | 0.52 | 43.0 | 2.82e-01 | 89.7% | 92.0% |
| 4293453 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 38.0 | 3.70e-01 | 98.5% | 70.0% |
| 3387378 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.51 | 42.0 | 4.02e-01 | 98.5% | 77.6% |
| 3277840 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.51 | 40.0 | 2.96e-01 | 89.7% | 91.7% |
| 4147366 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.51 | 34.0 | 3.76e-01 | 100.0% | 100.0% |
| 4302032 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.51 | 35.0 | 3.55e-01 | 98.5% | 75.4% |
| 3397446 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.51 | 44.0 | 3.05e-01 | 100.0% | 50.0% |
| 4975764 | 4.1.1.485 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6897 | 0.50 | 35.0 | 3.55e-01 | 100.0% | 72.9% |
| 3510526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 34.0 | 3.66e-01 | 100.0% | 90.9% |
| 4279092 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.50 | 44.0 | 3.01e-01 | 100.0% | 57.6% |
| 3238632 | 389.1.2.0 ↗ | few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain | 0.50 | 39.0 | 3.58e-01 | 94.1% | 64.4% |
| 3960372 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.50 | 34.0 | 3.27e-01 | 100.0% | 58.8% |
D2
medium
residues 89-178